C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00075F_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136935-ENSG00000173611 CGP 9606 9:124878357-125143506
GeneTranscriptPositionBiotype
ENSG00000173611 (SCAI)
suppressor of cancer cell invasion 		ENST00000336505 (SCAI-001) 124942608-125143496 protein_coding
ENST00000373549 (SCAI-003) 124952788-125143496 protein_coding
ENST00000467917 (SCAI-006) 124952869-124999923 nonsense_mediated_decay
ENST00000468569 (SCAI-005) 125142254-125143506 retained_intron
ENST00000477186 (SCAI-004) 124952788-125143487 nonsense_mediated_decay
ENST00000487795 (SCAI-002) 124999911-125003690 processed_transcript
ENST00000494102 (SCAI-007) 124971258-124976186 nonsense_mediated_decay
ENSG00000177736 (RP11-474P12.3)
 ENST00000411625 (RP11-474P12.3-001) 124968294-124968840 processed_pseudogene
ENSG00000199313 (RNU4-82P)
RNA, U4 small nuclear 82, pseudogene 		ENST00000362443 (RNU4-82P-201) 124887410-124887549 snRNA
ENSG00000264641 (AL354928.1)
 ENST00000580940 (AL354928.1-201) 124896833-124896932 miRNA
CIL_00075F_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026754-ENSMUSG00000035236 CGP 10090 2:39016261-39190730
GeneTranscriptPositionBiotype
ENSMUSG00000026754 (Golga1)
golgi autoantigen, golgin subfamily a, 1 		ENSMUST00000039165 (Golga1-001) 39016261-39065541 protein_coding
ENSMUST00000112850 (Golga1-003) 39016261-39065488 protein_coding
ENSMUST00000124463 (Golga1-008) 39016779-39018406 processed_transcript
ENSMUST00000126520 (Golga1-004) 39022712-39065488 processed_transcript
ENSMUST00000136261 (Golga1-005) 39047072-39065485 processed_transcript
ENSMUST00000149810 (Golga1-007) 39047021-39056117 processed_transcript
ENSMUST00000149842 (Golga1-009) 39018154-39019241 processed_transcript
ENSMUST00000153914 (Golga1-006) 39016503-39053008 processed_transcript
ENSMUST00000154210 (Golga1-010) 39017813-39019561 processed_transcript
ENSMUST00000184996 (Golga1-002) 39017653-39065488 nonsense_mediated_decay
ENSMUSG00000035236 (Scai)
suppressor of cancer cell invasion 		ENSMUST00000038874 (Scai-001) 39066214-39190730 protein_coding
ENSMUST00000131225 (Scai-005) 39106709-39108763 retained_intron
ENSMUST00000142872 (Scai-004) 39132979-39190728 protein_coding
ENSMUST00000147433 (Scai-002) 39080044-39190730 nonsense_mediated_decay
ENSMUST00000157038 (Scai-003) 39103482-39190730 retained_intron
ENSMUSG00000065127 (Gm26127)
predicted gene, 26127 		ENSMUST00000083193 (Gm26127-201) 39027777-39027883 snRNA
ENSMUSG00000082315 (Gm16523)
predicted gene, 16523 		ENSMUST00000121253 (Gm16523-001) 39161251-39161989 unprocessed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075F_0001ENSG00000173611ENST00000336505ENST00000373549ENST00000467917ENST00000468569ENST00000477186ENST00000487795ENST00000494102ENSG00000177736ENST00000411625ENSG00000199313ENST00000362443ENSG00000264641ENST00000580940CIL_00075F_0002ENSMUSG00000026754ENSMUST00000039165ENSMUST00000112850ENSMUST00000124463ENSMUST00000126520ENSMUST00000136261ENSMUST00000149810ENSMUST00000149842ENSMUST00000153914ENSMUST00000154210ENSMUST00000184996ENSMUSG00000035236ENSMUST00000038874ENSMUST00000131225ENSMUST00000142872ENSMUST00000147433ENSMUST00000157038ENSMUSG00000065127ENSMUST00000083193ENSMUSG00000082315ENSMUST00000121253
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00075F_0001ENSG00000173611ENST00000336505ENST00000373549ENSG00000177736ENST00000411625ENSG00000199313ENST00000362443ENSG00000264641ENST00000580940CIL_00075F_0002ENSMUSG00000026754ENSMUST00000039165ENSMUST00000126520ENSMUST00000153914ENSMUST00000184996ENSMUSG00000035236ENSMUST00000038874ENSMUST00000142872ENSMUST00000147433ENSMUST00000157038ENSMUSG00000065127ENSMUST00000083193ENSMUSG00000082315ENSMUST00000121253
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000173611 ENST00000336505 0.297±0.00 N/A N/A 2.811±0.17 N/A 0.218±0.00 0.335±0.11 N/A 1.182±0.00 0.939±0.67 0.627±0.00 0.630±0.24 N/A N/A
ENST00000373549 N/A N/A 1.366±0.00 8.250±0.00 2.476±0.00 N/A 0.653±0.00 N/A N/A 3.128±0.00 0.723±0.00 N/A N/A N/A
ENST00000467917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477186 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177736 ENST00000411625 N/A 0.030±0.00 N/A N/A 0.158±0.10 0.140±0.00 0.049±0.00 N/A 0.301±0.00 0.467±0.00 N/A 0.279±0.00 N/A 0.149±0.09
ENSG00000199313 ENST00000362443 N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000264641 ENST00000580940 1.220±0.00 2.599±0.00 N/A N/A N/A N/A 1.238±0.00 1.044±0.00 N/A 0.828±0.00 0.487±0.00 N/A N/A 0.918±0.26
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026754 ENSMUST00000039165 1.518±0.56 2.297±0.09 2.703±0.75 3.324±0.12 1.115±0.38 2.491±0.69 1.001±0.29 1.245±0.36 1.160±0.36 1.205±0.30 1.105±0.37 2.351±0.67 1.559±0.50 2.512±0.80
ENSMUST00000112850 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126520 N/A N/A N/A N/A N/A 2.294±0.00 N/A N/A 1.152±0.45 N/A N/A 3.164±0.70 2.747±1.08 N/A
ENSMUST00000136261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153914 4.594±0.36 3.407±0.32 3.513±2.50 8.653±4.83 3.399±1.15 3.155±1.14 1.927±0.54 3.740±0.95 2.007±0.75 3.275±0.94 1.080±0.34 3.811±1.59 2.442±1.14 3.672±0.30
ENSMUST00000154210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184996 N/A N/A N/A 7.454±0.00 N/A N/A N/A N/A N/A N/A N/A 14.632±0.00 13.086±0.44 18.907±0.00
ENSMUSG00000035236 ENSMUST00000038874 1.142±0.33 0.629±0.21 0.903±0.07 1.922±0.43 0.739±0.22 0.438±0.11 0.260±0.16 0.383±0.20 0.305±0.25 0.201±0.02 0.246±0.09 1.109±0.72 0.203±0.09 0.979±0.00
ENSMUST00000131225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142872 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.413±0.00 N/A N/A
ENSMUST00000147433 N/A 0.253±0.00 N/A N/A N/A N/A 0.288±0.00 0.456±0.09 0.244±0.08 0.598±0.05 N/A 0.462±0.00 1.153±0.00 1.510±0.04
ENSMUST00000157038 N/A 0.257±0.00 N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A 1.000±0.49 0.302±0.00 N/A
ENSMUSG00000065127 ENSMUST00000083193 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 205.353±0.00 N/A
ENSMUSG00000082315 ENSMUST00000121253 0.092±0.00 N/A 0.028±0.01 0.221±0.10 0.288±0.13 N/A N/A N/A 0.025±0.01 N/A N/A 0.067±0.00 0.110±0.00 0.074±0.00

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