C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: golgin A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000373555 GOLGA1-001 ENSG00000136935 9606 - 9:124878357-124941099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000373555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000373555 2.587±0.00 4.115±0.00 0.588±0.00 2.762±0.00 2.629±0.54 1.306±0.12 1.487±0.96 2.416±0.19 1.516±0.00 4.137±1.09 1.523±0.02 12.104±5.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C7 CIL_0002C7_0002 CGP 9:124862130-124948492
CIL_00075F CIL_00075F_0001 CGP 9:124878357-125143506

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000042 IEA protein targeting to Golgi
GO:0005515 IEA protein binding
GO:0005794 IDA Golgi apparatus
GO:0005802 IEA trans-Golgi network
GO:0016020 IEA membrane
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0048471 IEA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000184996 Golga1-002 nonsense_mediated_decay Mus_musculus 0 1666
ENSMUST00000039165 Golga1-001 protein_coding Mus_musculus 0 1666
ENSMUST00000112850 Golga1-003 protein_coding Mus_musculus 0 1188
ENSMUST00000136261 Golga1-005 processed_transcript Mus_musculus 0 979
ENSMUST00000126520 Golga1-004 processed_transcript Mus_musculus 0 979
ENSMUST00000153914 Golga1-006 processed_transcript Mus_musculus 0 773
ENSMUST00000149810 Golga1-007 processed_transcript Mus_musculus 0 444
ENSMUST00000149842 Golga1-009 processed_transcript Mus_musculus 0 431

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