C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 29
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000137962 ARHGAP29 9606 - 1:94148988-94275068 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000260526 ARHGAP29-001 94171751-94237565 protein_coding
  ENST00000370217 ARHGAP29-002 94201895-94237633 protein_coding
  ENST00000482481 ARHGAP29-003 94176613-94195940 processed_transcript
  ENST00000546444 ARHGAP29-005 94148988-94154829 retained_intron
  ENST00000552844 ARHGAP29-004 94149847-94275068 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260526ENST00000370217ENST00000482481ENST00000552844
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260526 11.252±0.00 8.387±0.00 3.254±0.00 1.996±0.60 2.328±0.12 1.313±0.22 0.902±0.00 7.517±4.18 2.203±0.21 12.327±1.85 1.167±0.47 2.582±1.00 3.170±1.73 5.854±0.45
ENST00000370217 N/A N/A 2.758±0.00 N/A N/A N/A N/A N/A N/A N/A 1.306±0.00 N/A N/A N/A
ENST00000482481 N/A 0.838±0.00 N/A N/A N/A N/A N/A 0.964±0.00 1.008±0.00 2.897±0.00 N/A 1.298±0.00 N/A N/A
ENST00000552844 N/A N/A N/A N/A N/A 0.489±0.00 N/A 1.327±0.00 1.788±0.00 N/A 0.659±0.00 N/A N/A 1.420±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DJ CIL_0009DJ_0001 VISTA 1:93815311-94417966
CIL_0009DI CIL_0009DI_0001 VISTA 1:93946469-94547443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005100 TAS Rho GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0007266 TAS Rho protein signal transduction
GO:0030165 IDA PDZ domain binding
GO:0032321 TAS positive regulation of Rho GTPase activity
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017748 arhgap29b Rho GTPase activating protein 29b protein_coding Danio_rerio
ENSDARG00000026329 arhgap29a Rho GTPase activating protein 29a protein_coding Danio_rerio
ENSMUSG00000039831 Arhgap29 Rho GTPase activating protein 29 protein_coding Mus_musculus

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