C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552844 ARHGAP29-004 ENSG00000137962 9606 - 1:94149847-94275068 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverMuscleTestisENST00000552844
Transcript ID Colon Kidney Liver Muscle Testis
ENST00000552844 0.489±0.00 1.327±0.00 1.788±0.00 0.659±0.00 1.420±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DJ CIL_0009DJ_0001 VISTA 1:93815311-94417966
CIL_0009DI CIL_0009DI_0001 VISTA 1:93946469-94547443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000037958 Arhgap29-001 protein_coding Mus_musculus 0 3362

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