C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000138081 FBXO11 9606 - 2:47789316-47905793 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000316377 FBXO11-201 47818417-47905577 protein_coding
  ENST00000402508 FBXO11-008 47806920-47888719 protein_coding
  ENST00000403359 FBXO11-001 47806920-47905793 protein_coding
  ENST00000405808 FBXO11-014 47789322-47809185 protein_coding
  ENST00000424163 FBXO11-004 47835915-47905210 protein_coding
  ENST00000434234 FBXO11-013 47789316-47809251 nonsense_mediated_decay
  ENST00000465204 FBXO11-007 47806752-47811661 retained_intron
  ENST00000470899 FBXO11-009 47809230-47814298 retained_intron
  ENST00000480038 FBXO11-010 47835952-47888719 processed_transcript
  ENST00000492225 FBXO11-005 47818417-47905568 retained_intron
  ENST00000493962 FBXO11-006 47812849-47835962 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000402508ENST00000403359ENST00000465204ENST00000493962
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000402508 N/A N/A 4.012±0.00 8.222±0.00 N/A N/A N/A N/A 4.097±0.00 N/A N/A N/A N/A
ENST00000403359 12.626±0.00 8.765±0.00 12.933±7.64 13.655±0.00 8.079±4.23 5.640±3.29 11.980±0.00 4.351±2.27 8.985±2.52 3.957±2.65 10.985±3.25 3.651±1.94 10.257±0.00
ENST00000465204 N/A 5.459±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493962 N/A N/A N/A N/A N/A N/A N/A 7.296±0.00 N/A N/A 13.499±0.00 10.250±0.00 28.571±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0001 CGP 2:47695530-47905793
CIL_00063U CIL_00063U_0001 CGP 2:47789316-48379294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 NAS ubiquitin ligase complex
GO:0004842 IEA:NAS ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006464 IDA cellular protein modification process
GO:0006511 NAS ubiquitin-dependent protein catabolic process
GO:0007605 IEA sensory perception of sound
GO:0008270 IEA zinc ion binding
GO:0016274 IDA protein-arginine N-methyltransferase activity
GO:0016567 IEA protein ubiquitination
GO:0035246 IDA peptidyl-arginine N-methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059973 fbxo11a F-box protein 11a protein_coding Danio_rerio
ENSDARG00000061631 fbxo11a F-box protein 11a protein_coding Danio_rerio
ENSMUSG00000005371 Fbxo11 F-box protein 11 protein_coding Mus_musculus

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