C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: F-box protein 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000005371 Fbxo11 10090 - 17:87990859-88065291 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000005504 Fbxo11-001 87990859-88065291 protein_coding
  ENSMUST00000127334 Fbxo11-003 87993213-88000982 retained_intron
  ENSMUST00000130379 Fbxo11-004 87990859-88065028 protein_coding
  ENSMUST00000135639 Fbxo11-002 87991418-88008696 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000005504ENSMUST00000127334ENSMUST00000130379ENSMUST00000135639
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000005504 1.581±0.00 N/A 5.264±0.00 10.003±0.90 4.009±0.00 N/A N/A N/A 2.320±0.24 N/A 3.970±0.90 5.350±0.27 4.456±1.55 N/A
ENSMUST00000127334 N/A N/A N/A 66.043±0.00 N/A N/A N/A N/A N/A N/A N/A 61.850±0.00 39.506±10.04 38.038±0.00
ENSMUST00000130379 10.777±2.97 11.788±2.06 11.586±0.12 20.013±4.17 10.305±1.67 7.362±1.21 5.619±0.56 8.116±1.37 4.918±1.09 16.136±1.41 2.781±0.99 11.748±3.38 7.823±1.86 3.984±0.59
ENSMUST00000135639 6.139±2.08 N/A N/A 14.845±4.79 7.474±2.02 N/A 3.778±1.16 4.230±0.23 N/A 15.778±0.00 N/A 20.099±4.94 15.380±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066I CIL_00066I_0002 CGP 17:87975050-88065291
CIL_00063U CIL_00063U_0002 CGP 17:87990859-88490533

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0006464 IEA cellular protein modification process
GO:0007605 IMP sensory perception of sound
GO:0008270 IEA zinc ion binding
GO:0016274 IEA protein-arginine N-methyltransferase activity
GO:0016567 IEA protein ubiquitination
GO:0035246 IEA peptidyl-arginine N-methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059973 fbxo11a F-box protein 11a protein_coding Danio_rerio
ENSDARG00000061631 fbxo11a F-box protein 11a protein_coding Danio_rerio
ENSG00000138081 FBXO11 F-box protein 11 protein_coding Homo_sapiens

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