C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trichoplein, keratin filament binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139437 TCHP 9606 + 12:109900264-109983841 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312777 TCHP-003 109900518-109918063 protein_coding
  ENST00000405876 TCHP-001 109900280-109918069 protein_coding
  ENST00000536408 TCHP-004 109900609-109906637 protein_coding
  ENST00000537218 TCHP-007 109900264-109905027 retained_intron
  ENST00000537880 TCHP-005 109914206-109918066 retained_intron
  ENST00000544838 TCHP-006 109900274-109953269 nonsense_mediated_decay
  ENST00000549524 TCHP-010 109929845-109934151 retained_intron
  ENST00000549550 TCHP-008 109908815-109914528 retained_intron
  ENST00000550780 TCHP-011 109933044-109983841 processed_transcript
  ENST00000551627 TCHP-009 109912973-109916741 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000405876
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000405876 4.952±0.00 8.993±0.00 2.095±1.30 4.199±0.00 3.234±1.87 2.563±0.00 5.573±0.00 1.834±0.22 2.707±0.00 3.834±0.00 6.575±0.95 4.704±0.17 9.351±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JH CIL_0001JH_0002 CGP 12:109850943-109983841
CIL_0001GG CIL_0001GG_0002 CGP 12:109900264-109996389

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005813 IDA centrosome
GO:0005886 IDA plasma membrane
GO:0006915 IDA apoptotic process
GO:0030308 IDA negative regulation of cell growth
GO:0045095 IDA keratin filament
GO:0045179 IDA apical cortex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035605 tchp trichoplein, keratin filament binding protein_coding Danio_rerio
ENSMUSG00000002486 Tchp trichoplein, keratin filament binding protein_coding Mus_musculus

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