C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000061921-ENSDARG00000035605 CGP 7955 5:21634156-21662580
GeneTranscriptPositionBiotype
ENSDARG00000035605 (tchp)
trichoplein, keratin filament binding 		ENSDART00000051614 (tchp-001) 21651122-21662580 protein_coding
ENSDARG00000061921 (gltpa)
glycolipid transfer protein a 		ENSDART00000088904 (gltpa-001) 21634156-21645094 protein_coding
CIL_0001JH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139433-ENSG00000139437 CGP 9606 12:109850943-109983841
GeneTranscriptPositionBiotype
ENSG00000139433 (GLTP)
glycolipid transfer protein 		ENST00000318348 (GLTP-001) 109850943-109880488 protein_coding
ENST00000536390 (GLTP-003) 109852665-109880383 nonsense_mediated_decay
ENST00000537066 (GLTP-002) 109855618-109880378 nonsense_mediated_decay
ENST00000540772 (GLTP-005) 109852545-109880325 protein_coding
ENST00000544393 (GLTP-004) 109852261-109880421 protein_coding
ENST00000617457 (GLTP-201) 109852555-109880374 protein_coding
ENSG00000139436 (GIT2)
G protein-coupled receptor kinase interacting ArfGAP 2 		ENST00000320063 (GIT2-007) 109948062-109996291 protein_coding
ENST00000354574 (GIT2-201) 109929802-109996389 protein_coding
ENST00000355312 (GIT2-001) 109929792-109996224 protein_coding
ENST00000361006 (GIT2-004) 109929804-109996304 protein_coding
ENST00000457474 (GIT2-010) 109929804-109996295 protein_coding
ENST00000546613 (GIT2-017) 109933096-109939022 processed_transcript
ENST00000547267 (GIT2-014) 109983608-109992088 retained_intron
ENST00000547694 (GIT2-016) 109952680-109959958 retained_intron
ENST00000547815 (GIT2-006) 109947322-109996296 protein_coding
ENST00000548000 (GIT2-018) 109933112-109943021 processed_transcript
ENST00000548643 (GIT2-012) 109980952-109996368 retained_intron
ENST00000548655 (GIT2-019) 109934037-109940501 processed_transcript
ENST00000549999 (GIT2-009) 109934040-109954550 retained_intron
ENST00000550186 (GIT2-005) 109933057-109996224 protein_coding
ENST00000550480 (GIT2-020) 109938535-109939685 retained_intron
ENST00000551209 (GIT2-011) 109932978-109996224 protein_coding
ENST00000551455 (GIT2-002) 109950694-109996373 retained_intron
ENST00000551721 (GIT2-015) 109961651-109983180 retained_intron
ENST00000552978 (GIT2-023) 109933038-109938977 retained_intron
ENST00000553118 (GIT2-008) 109932615-109996389 protein_coding
ENSG00000241413 (RN7SL441P)
RNA, 7SL, cytoplasmic 441, pseudogene 		ENST00000492388 (RN7SL441P-201) 109866214-109866509 misc_RNA
ENSG00000249094 (RP1-7G5.6)
 ENST00000446473 (RP1-7G5.6-001) 109880676-109888467 lincRNA
ENSG00000256351 (RP1-7G5.5)
 ENST00000536310 (RP1-7G5.5-001) 109859767-109860420 processed_pseudogene
CIL_0001JH_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000011884-ENSMUSG00000002486 CGP 10090 5:114669403-114722327
GeneTranscriptPositionBiotype
ENSMUSG00000002486 (Tchp)
trichoplein, keratin filament binding 		ENSMUST00000094441 (Tchp-001) 114707760-114722327 protein_coding
ENSMUST00000112199 (Tchp-003) 114714961-114722327 protein_coding
ENSMUST00000124242 (Tchp-002) 114707864-114722327 retained_intron
ENSMUST00000128625 (Tchp-006) 114717560-114718719 retained_intron
ENSMUST00000131679 (Tchp-005) 114714635-114719689 protein_coding
ENSMUST00000152999 (Tchp-004) 114707819-114709440 processed_transcript
ENSMUSG00000011884 (Gltp)
glycolipid transfer protein 		ENSMUST00000012028 (Gltp-001) 114669403-114690984 protein_coding
ENSMUST00000112212 (Gltp-003) 114670228-114690908 protein_coding
ENSMUST00000112214 (Gltp-002) 114670083-114690941 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JH_0001ENSDARG00000035605ENSDART00000051614ENSDARG00000061921ENSDART00000088904CIL_0001JH_0002ENSG00000139433ENST00000318348ENST00000536390ENST00000537066ENST00000540772ENST00000544393ENST00000617457ENSG00000139436ENST00000320063ENST00000354574ENST00000355312ENST00000361006ENST00000457474ENST00000546613ENST00000547267ENST00000547694ENST00000547815ENST00000548000ENST00000548643ENST00000548655ENST00000549999ENST00000550186ENST00000550480ENST00000551209ENST00000551455ENST00000551721ENST00000552978ENST00000553118ENSG00000241413ENST00000492388ENSG00000249094ENST00000446473ENSG00000256351ENST00000536310CIL_0001JH_0003ENSMUSG00000002486ENSMUST00000094441ENSMUST00000112199ENSMUST00000124242ENSMUST00000128625ENSMUST00000131679ENSMUST00000152999ENSMUSG00000011884ENSMUST00000012028ENSMUST00000112212ENSMUST00000112214
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JH_0001ENSDARG00000035605ENSDART00000051614ENSDARG00000061921ENSDART00000088904CIL_0001JH_0002ENSG00000139433ENST00000318348ENST00000544393ENSG00000139436ENST00000320063ENST00000354574ENST00000355312ENST00000361006ENST00000457474ENST00000547815ENST00000550186ENST00000551209ENST00000551455ENST00000553118ENSG00000241413ENST00000492388ENSG00000249094ENST00000446473ENSG00000256351ENST00000536310CIL_0001JH_0003ENSMUSG00000002486ENSMUST00000094441ENSMUST00000112199ENSMUST00000124242ENSMUST00000152999ENSMUSG00000011884ENSMUST00000012028ENSMUST00000112214
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035605 ENSDART00000051614 N/A N/A N/A 3.015±1.72 N/A N/A 1.564±0.87 2.124±1.19 0.142±0.00 N/A 0.637±0.00 N/A N/A N/A
ENSDARG00000061921 ENSDART00000088904 N/A N/A N/A N/A N/A N/A 1.087±0.31 3.715±0.31 0.561±0.00 N/A 1.266±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000139433 ENST00000318348 21.132±0.00 12.811±0.00 1.470±0.00 11.649±5.84 7.861±5.18 6.224±2.62 4.769±3.63 9.773±8.75 4.289±0.85 10.960±8.78 4.394±3.96 10.433±5.16 9.019±4.44 7.200±3.01
ENST00000536390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000537066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540772 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.577±0.00 6.540±0.00 N/A 4.705±0.00
ENST00000617457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000139436 ENST00000320063 N/A N/A N/A N/A N/A 1.903±0.00 N/A N/A N/A 2.858±0.00 N/A 2.551±0.00 N/A N/A
ENST00000354574 N/A N/A N/A N/A 3.097±0.00 1.176±0.00 2.501±0.00 2.105±0.00 1.105±0.00 N/A N/A 2.843±0.00 1.608±0.00 N/A
ENST00000355312 5.669±0.00 8.025±0.00 2.016±0.00 1.812±0.00 2.493±1.26 2.260±0.00 2.963±1.97 4.211±0.00 1.414±0.10 3.101±1.17 7.318±0.00 5.315±2.16 8.059±0.59 2.290±0.00
ENST00000361006 N/A N/A N/A 0.704±0.00 1.080±0.00 2.041±0.36 N/A N/A N/A N/A N/A N/A N/A 6.191±0.50
ENST00000457474 N/A N/A N/A 1.813±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000546613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547815 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.029±0.00 N/A N/A N/A N/A
ENST00000548000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549999 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550186 N/A N/A N/A N/A N/A N/A N/A 2.020±0.00 N/A N/A N/A N/A N/A N/A
ENST00000550480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551209 N/A N/A N/A N/A N/A N/A N/A N/A 3.607±0.00 N/A 2.969±0.00 N/A N/A N/A
ENST00000551455 N/A N/A 3.983±0.00 N/A 4.516±0.00 3.342±0.00 2.104±0.00 1.723±0.00 N/A N/A N/A 3.400±0.00 N/A N/A
ENST00000551721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.923±0.00
ENSG00000241413 ENST00000492388 N/A 0.337±0.00 N/A 0.238±0.00 N/A 0.472±0.00 N/A 0.056±0.00 N/A N/A 0.348±0.00 0.956±0.33 N/A 0.322±0.04
ENSG00000249094 ENST00000446473 0.122±0.00 0.174±0.00 N/A 0.231±0.00 0.210±0.00 0.071±0.00 0.070±0.00 0.178±0.00 N/A 0.045±0.00 0.236±0.00 0.101±0.00 0.064±0.00 0.392±0.19
ENSG00000256351 ENST00000536310 N/A 0.275±0.00 N/A 0.517±0.28 0.114±0.00 0.083±0.00 N/A 0.060±0.00 0.843±0.00 0.025±0.00 N/A 0.215±0.00 N/A 0.239±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002486 ENSMUST00000094441 2.035±0.60 2.742±0.98 3.591±0.55 4.388±1.99 1.674±0.53 1.956±1.05 0.847±0.23 1.818±0.22 1.943±1.28 2.493±0.80 1.050±0.30 2.957±1.17 3.779±1.22 31.519±14.37
ENSMUST00000112199 2.776±1.06 3.456±1.34 4.001±0.31 3.561±0.22 3.573±1.23 1.876±0.58 1.372±0.09 1.565±0.17 1.733±1.04 1.716±0.17 0.483±0.05 2.649±1.25 1.789±0.37 15.144±1.73
ENSMUST00000124242 N/A N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A N/A 0.304±0.10 1.020±0.00 0.907±0.22 N/A
ENSMUST00000128625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152999 N/A 6.232±1.10 N/A N/A N/A 2.631±0.00 1.678±0.12 N/A 1.002±0.16 N/A N/A N/A N/A N/A
ENSMUSG00000011884 ENSMUST00000012028 30.563±9.41 25.357±6.43 87.182±10.66 7.588±4.30 28.809±11.22 42.801±4.77 10.419±2.60 25.299±2.67 9.290±7.83 56.455±7.51 4.007±0.24 19.485±5.68 20.562±15.22 3.057±1.55
ENSMUST00000112212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112214 17.829±3.52 47.404±11.71 N/A 3.636±0.00 35.367±3.87 40.410±9.94 3.804±1.29 7.657±0.00 0.586±0.08 33.473±4.37 N/A 18.840±4.53 N/A 1.384±0.00

Loading