C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trichoplein, keratin filament binding
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000405876 TCHP-001 ENSG00000139437 9606 + 12:109900280-109918069 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000405876
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000405876 4.952±0.00 8.993±0.00 2.095±1.30 4.199±0.00 3.234±1.87 2.563±0.00 5.573±0.00 1.834±0.22 2.707±0.00 3.834±0.00 6.575±0.95 4.704±0.17 9.351±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JH CIL_0001JH_0002 CGP 12:109850943-109983841
CIL_0001GG CIL_0001GG_0002 CGP 12:109900264-109996389

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005813 IDA centrosome
GO:0005886 IDA plasma membrane
GO:0006915 IDA apoptotic process
GO:0030308 IDA negative regulation of cell growth
GO:0045095 IDA keratin filament
GO:0045179 IDA apical cortex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094441 Tchp-001 protein_coding Mus_musculus 0 1212
ENSMUST00000124242 Tchp-002 retained_intron Mus_musculus 0 1064
ENSMUST00000112199 Tchp-003 protein_coding Mus_musculus 0 747
ENSMUST00000131679 Tchp-005 protein_coding Mus_musculus 0 462
ENSMUST00000128625 Tchp-006 retained_intron Mus_musculus 2e-38 165

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