C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | trichoplein, keratin filament binding | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000544838  |
TCHP-006 |
ENSG00000139437 |
9606 | + |
12:109900274-109953269  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001JH | CIL_0001JH_0002 | CGP | 12:109850943-109983841 |
| CIL_0001GG | CIL_0001GG_0002 | CGP | 12:109900264-109996389 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005739 | IDA | mitochondrion |
| GO:0005813 | IDA | centrosome |
| GO:0005886 | IDA | plasma membrane |
| GO:0006915 | IDA | apoptotic process |
| GO:0030308 | IDA | negative regulation of cell growth |
| GO:0045095 | IDA | keratin filament |
| GO:0045179 | IDA | apical cortex |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000094441
|
Tchp-001 | protein_coding | Mus_musculus | 0 | 1212 |
|
ENSMUST00000124242
|
Tchp-002 | retained_intron | Mus_musculus | 0 | 1064 |
|
ENSMUST00000112199
|
Tchp-003 | protein_coding | Mus_musculus | 0 | 747 |
|
ENSMUST00000131679
|
Tchp-005 | protein_coding | Mus_musculus | 0 | 462 |
|
ENSMUST00000128625
|
Tchp-006 | retained_intron | Mus_musculus | 2e-38 | 165 |
|
ENSMUST00000100812
|
Git1-004 | protein_coding | Mus_musculus | 4e-20 | 104 |
|
ENSMUST00000037285
|
Git1-001 | protein_coding | Mus_musculus | 4e-20 | 104 |
