C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: trichoplein, keratin filament binding
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002486 Tchp 10090 + 5:114707760-114722327 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094441 Tchp-001 114707760-114722327 protein_coding
  ENSMUST00000112199 Tchp-003 114714961-114722327 protein_coding
  ENSMUST00000124242 Tchp-002 114707864-114722327 retained_intron
  ENSMUST00000128625 Tchp-006 114717560-114718719 retained_intron
  ENSMUST00000131679 Tchp-005 114714635-114719689 protein_coding
  ENSMUST00000152999 Tchp-004 114707819-114709440 processed_transcript

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094441ENSMUST00000112199ENSMUST00000124242ENSMUST00000152999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094441 2.035±0.60 2.742±0.98 3.591±0.55 4.388±1.99 1.674±0.53 1.956±1.05 0.847±0.23 1.818±0.22 1.943±1.28 2.493±0.80 1.050±0.30 2.957±1.17 3.779±1.22 31.519±14.37
ENSMUST00000112199 2.776±1.06 3.456±1.34 4.001±0.31 3.561±0.22 3.573±1.23 1.876±0.58 1.372±0.09 1.565±0.17 1.733±1.04 1.716±0.17 0.483±0.05 2.649±1.25 1.789±0.37 15.144±1.73
ENSMUST00000124242 N/A N/A N/A 0.828±0.00 N/A N/A N/A N/A N/A N/A 0.304±0.10 1.020±0.00 0.907±0.22 N/A
ENSMUST00000152999 N/A 6.232±1.10 N/A N/A N/A 2.631±0.00 1.678±0.12 N/A 1.002±0.16 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JH CIL_0001JH_0003 CGP 5:114669403-114722327
CIL_0001GG CIL_0001GG_0003 CGP 5:114707760-114775517

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0005739 ISS mitochondrion
GO:0005813 IEA centrosome
GO:0005886 ISS plasma membrane
GO:0006915 ISS apoptotic process
GO:0030308 ISS negative regulation of cell growth
GO:0045095 ISS keratin filament
GO:0045179 ISS apical cortex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035605 tchp trichoplein, keratin filament binding protein_coding Danio_rerio
ENSG00000139437 TCHP trichoplein, keratin filament binding protein_coding Homo_sapiens

Loading