C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET domain containing 1B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139718 SETD1B 9606 + 12:121804180-121832584 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267197 SETD1B-201 121804738-121830239 protein_coding
  ENST00000542440 SETD1B-001 121804180-121832584 protein_coding
  ENST00000604567 SETD1B-002 121804180-121830239 protein_coding
  ENST00000619791 SETD1B-202 121804738-121830239 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLungMusclePlacentaENST00000542440ENST00000619791
Transcript ID Bladder Breast Heart Lung Muscle Placenta
ENST00000542440 N/A N/A N/A 1.675±0.00 0.516±0.12 3.344±0.00
ENST00000619791 0.539±0.00 0.205±0.00 0.156±0.00 N/A N/A 0.715±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00006S CIL_00006S_0002 CGP 12:121777754-121832584
CIL_0002ZI CIL_0002ZI_0001 CGP 12:121804180-121863596

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005694 IEA chromosome
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0035097 IDA histone methyltransferase complex
GO:0042800 IDA histone methyltransferase activity (H3-K4 specific)
GO:0048188 IDA Set1C/COMPASS complex
GO:0051568 IDA histone H3-K4 methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060847 setd1ba SET domain containing 1B, a protein_coding Danio_rerio
ENSMUSG00000038384 Setd1b SET domain containing 1B protein_coding Mus_musculus

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