C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0002ZI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139718-ENSG00000158104 CGP 9606 12:121804180-121863596
GeneTranscriptPositionBiotype
ENSG00000158104 (HPD)
4-hydroxyphenylpyruvate dioxygenase
ENST00000289004 (HPD-002) 121839527-121858859 protein_coding
ENST00000535114 (HPD-003) 121856598-121858855 retained_intron
ENST00000542159 (HPD-004) 121848990-121857583 retained_intron
ENST00000543163 (HPD-001) 121839530-121863596 protein_coding
ENST00000543869 (HPD-005) 121846862-121849791 processed_transcript
ENSG00000256811 (RP11-7M8.2)
ENST00000543848 (RP11-7M8.2-001) 121856259-121857059 antisense
CIL_0002ZI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038384-ENSMUSG00000029445 CGP 10090 5:123142193-123182725
GeneTranscriptPositionBiotype
ENSMUSG00000029445 (Hpd)
4-hydroxyphenylpyruvic acid dioxygenase
ENSMUST00000031398 (Hpd-001) 123171807-123182725 protein_coding
ENSMUST00000124110 (Hpd-004) 123180659-123182067 processed_transcript
ENSMUST00000144679 (Hpd-005) 123172101-123175915 protein_coding
ENSMUST00000154713 (Hpd-002) 123177529-123182723 protein_coding
ENSMUST00000155092 (Hpd-006) 123171872-123172911 processed_transcript
ENSMUST00000156539 (Hpd-003) 123177529-123182722 retained_intron
ENSMUSG00000038384 (Setd1b)
SET domain containing 1B
ENSMUST00000056053 (Setd1b-201) 123142957-123167410 protein_coding
ENSMUST00000100731 (Setd1b-004) 123142193-123149981 retained_intron
ENSMUST00000162839 (Setd1b-003) 123163381-123164107 protein_coding
ENSMUST00000163030 (Setd1b-001) 123142193-123167435 protein_coding
ENSMUST00000173221 (Setd1b-005) 123162709-123165162 retained_intron
ENSMUST00000174836 (Setd1b-002) 123142193-123167410 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZI_0001ENSG00000158104ENST00000289004ENST00000535114ENST00000542159ENST00000543163ENST00000543869ENSG00000256811ENST00000543848CIL_0002ZI_0002ENSMUSG00000029445ENSMUST00000031398ENSMUST00000124110ENSMUST00000144679ENSMUST00000154713ENSMUST00000155092ENSMUST00000156539ENSMUSG00000038384ENSMUST00000056053ENSMUST00000100731ENSMUST00000162839ENSMUST00000163030ENSMUST00000173221ENSMUST00000174836
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002ZI_0001ENSG00000158104ENST00000289004ENST00000542159ENST00000543163ENST00000543869ENSG00000256811ENST00000543848CIL_0002ZI_0002ENSMUSG00000029445ENSMUST00000031398ENSMUST00000124110ENSMUST00000144679ENSMUST00000154713ENSMUST00000155092ENSMUST00000156539ENSMUSG00000038384ENSMUST00000056053ENSMUST00000100731ENSMUST00000163030ENSMUST00000173221ENSMUST00000174836
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158104 ENST00000289004 0.021±0.00 1.371±0.00 35.589±0.00 0.736±0.58 1.437±0.56 0.624±0.00 0.103±0.00 241.574±179.18 367.023±366.67 0.323±0.00 0.424±0.00 1.404±1.64 0.810±0.61 3.409±0.23
ENST00000535114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542159 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.448±0.00 N/A N/A N/A N/A
ENST00000543163 N/A 0.356±0.00 N/A N/A 0.528±0.00 N/A N/A N/A N/A 0.328±0.00 N/A N/A 0.134±0.00 1.489±0.00
ENST00000543869 0.139±0.00 N/A N/A N/A N/A 0.427±0.00 0.480±0.00 N/A N/A N/A N/A 0.099±0.00 N/A N/A
ENSG00000256811 ENST00000543848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029445 ENSMUST00000031398 0.401±0.20 0.173±0.11 0.066±0.03 N/A 2.093±1.87 42.328±3.21 0.237±0.15 144.618±2.78 977.286±885.18 0.481±0.12 0.112±0.07 0.786±0.64 0.705±0.18 0.175±0.02
ENSMUST00000124110 N/A 0.601±0.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A
ENSMUST00000144679 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A 0.522±0.00 N/A 1.185±0.99 0.673±0.00 N/A
ENSMUST00000154713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 0.096±0.00
ENSMUST00000155092 0.182±0.00 0.355±0.24 N/A N/A N/A N/A 0.062±0.01 N/A N/A 0.295±0.00 N/A 0.826±0.20 0.389±0.00 0.859±0.08
ENSMUST00000156539 N/A 0.181±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.089±0.00 N/A
ENSMUSG00000038384 ENSMUST00000056053 1.516±0.14 2.404±0.60 N/A 1.458±0.00 1.167±0.57 1.373±0.68 0.439±0.05 1.147±0.39 0.885±0.45 3.144±0.04 0.398±0.06 1.413±0.84 5.907±4.86 2.880±1.47
ENSMUST00000100731 N/A N/A N/A N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000162839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163030 1.030±0.00 4.939±1.29 N/A N/A 1.706±0.69 1.986±0.00 N/A 0.916±0.17 0.683±0.38 1.588±0.00 N/A 1.044±0.24 1.446±0.05 1.117±0.00
ENSMUST00000173221 N/A N/A N/A N/A 0.389±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174836 0.655±0.00 N/A N/A N/A 2.696±1.02 2.690±0.29 N/A 0.524±0.12 N/A 2.814±0.79 N/A 1.870±0.71 N/A N/A

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