C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000139988 RDH12 9606 + 14:67701886-67734452 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000267502 RDH12-201 67720842-67734450 protein_coding
  ENST00000547463 RDH12-003 67717806-67720899 processed_transcript
  ENST00000551171 RDH12-001 67701886-67734452 protein_coding
  ENST00000552873 RDH12-002 67727164-67729746 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverENST00000267502
Transcript ID Bladder Liver
ENST00000267502 1.888±0.00 3.732±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CM CIL_0002CM_0001 CGP 14:67676801-67734452
CIL_0001JS CIL_0001JS_0002 CGP 14:67701886-67816590

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0003824 IEA catalytic activity
GO:0004745 IDA retinol dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005622 IDA intracellular
GO:0007601 TAS visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008152 IEA metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0042572 IDA retinol metabolic process
GO:0045494 TAS photoreceptor cell maintenance
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process
GO:0060342 TAS photoreceptor inner segment membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000018069 rdh12 retinol dehydrogenase 12 (all-trans and 9-cis) protein_coding Danio_rerio
ENSMUSG00000021123 Rdh12 retinol dehydrogenase 12 protein_coding Mus_musculus

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