C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: thioredoxin-like 4B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031723 Txnl4b 10090 + 8:109565892-109574051 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000034159 Txnl4b-001 109565892-109574051 protein_coding
  ENSMUST00000178445 Txnl4b-201 109568888-109573523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000034159ENSMUST00000178445
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000034159 4.809±0.56 2.792±0.69 2.160±0.69 3.109±1.56 3.276±0.68 1.902±0.52 1.978±0.42 3.873±0.44 3.003±1.09 3.084±0.46 3.566±0.66 3.125±0.76 2.619±0.90 18.528±6.86
ENSMUST00000178445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.925±0.00 1.914±0.18 1.817±0.54 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008FG CIL_0008FG_0002 VISTA 8:109010589-109613918
CIL_00098B CIL_00098B_0002 VISTA 8:109116597-109718209
CIL_00098E CIL_00098E_0002 VISTA 8:109136455-109737561
CIL_0002Q2 CIL_0002Q2_0002 CGP 8:109565892-109579172

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000398 ISO mRNA splicing, via spliceosome
GO:0003674 ND molecular_function
GO:0005634 ISO nucleus
GO:0005681 IEA spliceosomal complex
GO:0007067 IEA mitotic nuclear division
GO:0008284 ISO positive regulation of cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058962 txnl4b thioredoxin-like 4B protein_coding Danio_rerio
ENSG00000140830 TXNL4B thioredoxin-like 4B protein_coding Homo_sapiens

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