C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: C-type lectin domain family 18, member B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140839 CLEC18B 9606 - 16:74408270-74421953 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339953 CLEC18B-001 74408631-74421392 protein_coding
  ENST00000425714 CLEC18B-002 74411887-74421470 retained_intron
  ENST00000564842 CLEC18B-003 74411353-74412799 retained_intron
  ENST00000617101 CLEC18B-201 74408270-74421756 protein_coding
  ENST00000619275 CLEC18B-202 74408270-74421953 protein_coding
  ENST00000620745 CLEC18B-203 74408633-74421404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyOvaryPlacentaTestisENST00000339953ENST00000425714ENST00000564842ENST00000619275ENST00000620745
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Ovary Placenta Testis
ENST00000339953 N/A 0.650±0.00 0.009±0.00 N/A N/A N/A 0.571±0.00 0.046±0.00 N/A N/A
ENST00000425714 N/A 0.179±0.00 N/A N/A 0.052±0.00 N/A 0.298±0.00 0.047±0.00 0.064±0.00 N/A
ENST00000564842 0.340±0.00 N/A 0.130±0.00 N/A N/A N/A N/A 0.279±0.00 N/A 0.392±0.00
ENST00000619275 N/A N/A N/A 0.013±0.00 N/A 0.032±0.00 0.606±0.00 N/A N/A 0.151±0.00
ENST00000620745 N/A N/A 0.009±0.00 N/A N/A N/A N/A 0.048±0.00 N/A 0.222±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090U CIL_00090U_0001 VISTA 16:73974670-74575347

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000033633 Clec18a C-type lectin domain family 18, member A protein_coding Mus_musculus

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