Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	C-type lectin domain family 18, member B
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSG00000140839	CLEC18B	9606	-	16:74408270-74421953	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENST00000339953		CLEC18B-001	74408631-74421392	protein_coding
	ENST00000425714		CLEC18B-002	74411887-74421470	retained_intron
	ENST00000564842		CLEC18B-003	74411353-74412799	retained_intron
	ENST00000617101		CLEC18B-201	74408270-74421756	protein_coding
	ENST00000619275		CLEC18B-202	74408270-74421953	protein_coding
	ENST00000620745		CLEC18B-203	74408633-74421404	protein_coding
Homo sapiens EnsemblGRCh38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Ovary	Placenta	Testis
ENST00000339953	N/A	0.650±0.00	0.009±0.00	N/A	N/A	N/A	0.571±0.00	0.046±0.00	N/A	N/A
ENST00000425714	N/A	0.179±0.00	N/A	N/A	0.052±0.00	N/A	0.298±0.00	0.047±0.00	0.064±0.00	N/A
ENST00000564842	0.340±0.00	N/A	0.130±0.00	N/A	N/A	N/A	N/A	0.279±0.00	N/A	0.392±0.00
ENST00000619275	N/A	N/A	N/A	0.013±0.00	N/A	0.032±0.00	0.606±0.00	N/A	N/A	0.151±0.00
ENST00000620745	N/A	N/A	0.009±0.00	N/A	N/A	N/A	N/A	0.048±0.00	N/A	0.222±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00090U	CIL_00090U_0001	VISTA	16:73974670-74575347

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005515	IEA	protein binding
GO:0005576	IEA	extracellular region
GO:0030246	IEA	carbohydrate binding

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSMUSG00000033633	Clec18a	C-type lectin domain family 18, member A	protein_coding	Mus_musculus

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