C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: C-type lectin domain family 18, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619275 CLEC18B-202 ENSG00000140839 9606 - 16:74408270-74421953 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartKidneyTestisENST00000619275
Transcript ID Breast Heart Kidney Testis
ENST00000619275 0.013±0.00 0.032±0.00 0.606±0.00 0.151±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090U CIL_00090U_0001 VISTA 16:73974670-74575347

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186384 Clec18a-001 nonsense_mediated_decay Mus_musculus 0 1166
ENSMUST00000188466 Clec18a-003 protein_coding Mus_musculus 0 1166
ENSMUST00000191030 Clec18a-004 nonsense_mediated_decay Mus_musculus 0 1166
ENSMUST00000039597 Clec18a-007 protein_coding Mus_musculus 0 1151
ENSMUST00000191469 Clec18a-005 nonsense_mediated_decay Mus_musculus 0 1151
ENSMUST00000190778 Clec18a-006 nonsense_mediated_decay Mus_musculus 0 1151
ENSMUST00000190222 Clec18a-002 nonsense_mediated_decay Mus_musculus 0 894

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