C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: copine II
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000140848 CPNE2 9606 + 16:57092537-57148367 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000290776 CPNE2-001 57092537-57148367 protein_coding
  ENST00000535318 CPNE2-002 57092607-57147966 protein_coding
  ENST00000565766 CPNE2-009 57119199-57137248 protein_coding
  ENST00000565874 CPNE2-003 57110551-57147795 protein_coding
  ENST00000565951 CPNE2-005 57124248-57147964 processed_transcript
  ENST00000566042 CPNE2-004 57123306-57147964 retained_intron
  ENST00000566259 CPNE2-008 57106051-57113352 protein_coding
  ENST00000566910 CPNE2-006 57129052-57147966 processed_transcript
  ENST00000567011 CPNE2-010 57145640-57147769 retained_intron
  ENST00000567487 CPNE2-007 57112842-57119639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000290776ENST00000535318ENST00000565766ENST00000565874ENST00000565951ENST00000566042ENST00000566259ENST00000566910ENST00000567487
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000290776 N/A N/A 1.578±0.00 1.105±0.00 0.872±0.00 N/A N/A N/A N/A 0.687±0.62 2.513±0.00 N/A N/A
ENST00000535318 N/A N/A 7.070±0.00 1.816±0.00 N/A 4.346±0.00 1.965±0.81 2.442±0.00 6.802±0.00 4.284±0.00 12.230±1.55 11.314±4.59 9.904±0.00
ENST00000565766 N/A N/A N/A N/A N/A N/A N/A 1.845±0.00 N/A N/A N/A N/A N/A
ENST00000565874 7.777±0.00 1.704±0.00 8.601±6.67 16.821±0.00 7.932±6.38 1.326±0.59 8.993±0.00 1.824±0.09 5.684±2.77 5.465±0.00 2.080±1.26 11.076±5.60 5.033±0.19
ENST00000565951 N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566042 N/A N/A 2.835±0.00 0.570±0.00 N/A 0.197±0.00 0.219±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.296±0.00
ENST00000566910 N/A N/A N/A N/A 8.582±0.00 N/A N/A N/A 8.938±0.00 N/A N/A 7.692±0.00 6.085±0.00
ENST00000567487 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00 2.109±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0002 CGP 16:56989485-57148367
CIL_000524 CIL_000524_0002 CGP 16:57092537-57186116

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007753 cpne2 copine II protein_coding Danio_rerio
ENSMUSG00000034361 Cpne2 copine II protein_coding Mus_musculus

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