C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: copine II
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034361 Cpne2 10090 + 8:94532990-94570529 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048653 Cpne2-001 94532990-94570529 protein_coding
  ENSMUST00000109537 Cpne2-002 94533067-94570390 protein_coding
  ENSMUST00000136550 Cpne2-003 94533067-94549823 processed_transcript
  ENSMUST00000156377 Cpne2-004 94562650-94570114 retained_intron
  ENSMUST00000156894 Cpne2-005 94533039-94548827 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048653ENSMUST00000109537ENSMUST00000136550ENSMUST00000156377ENSMUST00000156894
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048653 13.640±4.01 6.868±2.77 6.975±0.69 4.826±1.99 10.411±5.09 17.351±2.67 1.573±0.70 5.940±0.67 2.388±1.05 3.979±1.63 1.402±0.51 5.809±1.66 1.359±0.61 0.337±0.10
ENSMUST00000109537 10.226±5.78 2.799±0.00 3.871±0.35 2.634±0.60 7.960±1.42 N/A 0.931±0.12 1.821±0.00 0.496±0.18 1.713±0.54 0.918±0.52 1.898±0.45 0.675±0.32 0.383±0.15
ENSMUST00000136550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.16
ENSMUST00000156377 27.763±0.00 10.830±1.50 N/A 7.179±0.00 17.830±3.87 18.674±4.24 2.339±0.00 5.558±1.15 2.446±0.89 6.250±2.15 N/A 10.117±2.55 1.650±0.53 0.859±0.22
ENSMUST00000156894 N/A 33.911±10.92 N/A N/A N/A 17.009±0.00 N/A N/A N/A N/A N/A 11.765±1.53 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051Y CIL_00051Y_0003 CGP 8:94472763-94570529
CIL_000524 CIL_000524_0003 CGP 8:94532990-94601726

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007753 cpne2 copine II protein_coding Danio_rerio
ENSG00000140848 CPNE2 copine II protein_coding Homo_sapiens

Loading