C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00051Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000024631-ENSDARG00000007753 CGP 7955 18:17283463-17362630
GeneTranscriptPositionBiotype
ENSDARG00000007753 (cpne2)
copine II 		ENSDART00000021213 (cpne2-001) 17323066-17362630 protein_coding
ENSDART00000143475 (cpne2-002) 17319570-17331711 protein_coding
ENSDARG00000024631 (NLRC5)
NLR family, CARD domain containing 5 		ENSDART00000033762 (NLRC5-201) 17284594-17316964 protein_coding
ENSDART00000151865 (NLRC5-001) 17283463-17316969 protein_coding
ENSDARG00000082214 (BX470074.1)
 ENSDART00000115625 (BX470074.1-201) 17354241-17354307 miRNA
ENSDARG00000083999 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000119399 (5S_rRNA.461-201) 17334508-17334623 rRNA
CIL_00051Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140853-ENSG00000140848 CGP 9606 16:56989485-57148367
GeneTranscriptPositionBiotype
ENSG00000140848 (CPNE2)
copine II 		ENST00000290776 (CPNE2-001) 57092537-57148367 protein_coding
ENST00000535318 (CPNE2-002) 57092607-57147966 protein_coding
ENST00000565766 (CPNE2-009) 57119199-57137248 protein_coding
ENST00000565874 (CPNE2-003) 57110551-57147795 protein_coding
ENST00000565951 (CPNE2-005) 57124248-57147964 processed_transcript
ENST00000566042 (CPNE2-004) 57123306-57147964 retained_intron
ENST00000566259 (CPNE2-008) 57106051-57113352 protein_coding
ENST00000566910 (CPNE2-006) 57129052-57147966 processed_transcript
ENST00000567011 (CPNE2-010) 57145640-57147769 retained_intron
ENST00000567487 (CPNE2-007) 57112842-57119639 protein_coding
ENSG00000140853 (NLRC5)
NLR family, CARD domain containing 5 		ENST00000262510 (NLRC5-001) 56989498-57083524 protein_coding
ENST00000399221 (NLRC5-026) 57058065-57062003 protein_coding
ENST00000436936 (NLRC5-201) 57017074-57083524 protein_coding
ENST00000534927 (NLRC5-029) 57075925-57082597 retained_intron
ENST00000534931 (NLRC5-023) 57045297-57055036 retained_intron
ENST00000535284 (NLRC5-024) 57059183-57062004 retained_intron
ENST00000535658 (NLRC5-017) 56989594-56991126 processed_transcript
ENST00000536231 (NLRC5-020) 57026639-57030084 retained_intron
ENST00000537056 (NLRC5-012) 57043581-57083524 nonsense_mediated_decay
ENST00000538059 (NLRC5-016) 57004486-57020769 protein_coding
ENST00000538110 (NLRC5-006) 57026423-57061933 protein_coding
ENST00000538273 (NLRC5-019) 56989563-57021112 retained_intron
ENST00000538453 (NLRC5-009) 57034172-57083531 nonsense_mediated_decay
ENST00000538778 (NLRC5-021) 57041408-57061519 retained_intron
ENST00000538805 (NLRC5-004) 57025687-57062003 protein_coding
ENST00000538930 (NLRC5-011) 57041321-57062744 retained_intron
ENST00000539144 (NLRC5-013) 57020713-57083519 protein_coding
ENST00000539881 (NLRC5-003) 56989485-57048354 nonsense_mediated_decay
ENST00000540182 (NLRC5-010) 57040688-57083524 nonsense_mediated_decay
ENST00000541020 (NLRC5-022) 57041488-57043808 retained_intron
ENST00000543030 (NLRC5-008) 57026879-57061966 protein_coding
ENST00000543049 (NLRC5-030) 57080999-57082633 retained_intron
ENST00000543103 (NLRC5-014) 57080819-57083520 retained_intron
ENST00000543141 (NLRC5-018) 56989563-56992444 processed_transcript
ENST00000543402 (NLRC5-025) 57059200-57061933 retained_intron
ENST00000544189 (NLRC5-027) 57074171-57076851 retained_intron
ENST00000544641 (NLRC5-015) 57003853-57020936 protein_coding
ENST00000545081 (NLRC5-007) 57025762-57083519 nonsense_mediated_decay
ENST00000545349 (NLRC5-028) 57069877-57077369 nonsense_mediated_decay
ENSG00000259922 (RP11-322D14.1)
 ENST00000566704 (RP11-322D14.1-001) 57013071-57014100 processed_pseudogene
ENSG00000260145 (RP11-322D14.2)
 ENST00000562970 (RP11-322D14.2-001) 57052505-57058497 antisense
ENSG00000260148 (RP11-407G23.1)
 ENST00000565829 (RP11-407G23.1-001) 57091213-57092303 antisense
ENSG00000279019 (RP11-407G23.2)
 ENST00000623921 (RP11-407G23.2-001) 57140896-57144586 TEC
ENSG00000279803 (RP11-407G23.5)
 ENST00000624886 (RP11-407G23.5-001) 57142652-57144936 TEC
CIL_00051Y_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000074151-ENSMUSG00000034361 CGP 10090 8:94472763-94570529
GeneTranscriptPositionBiotype
ENSMUSG00000034361 (Cpne2)
copine II 		ENSMUST00000048653 (Cpne2-001) 94532990-94570529 protein_coding
ENSMUST00000109537 (Cpne2-002) 94533067-94570390 protein_coding
ENSMUST00000136550 (Cpne2-003) 94533067-94549823 processed_transcript
ENSMUST00000156377 (Cpne2-004) 94562650-94570114 retained_intron
ENSMUST00000156894 (Cpne2-005) 94533039-94548827 retained_intron
ENSMUSG00000074151 (Nlrc5)
NLR family, CARD domain containing 5 		ENSMUST00000053085 (Nlrc5-003) 94472763-94527272 protein_coding
ENSMUST00000098489 (Nlrc5-201) 94525067-94527264 protein_coding
ENSMUST00000137032 (Nlrc5-001) 94525067-94527268 retained_intron
ENSMUST00000182409 (Nlrc5-004) 94476126-94506778 retained_intron
ENSMUST00000183132 (Nlrc5-005) 94482039-94491589 nonsense_mediated_decay
ENSMUST00000183287 (Nlrc5-006) 94521431-94523509 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051Y_0001ENSDARG00000007753ENSDART00000021213ENSDART00000143475ENSDARG00000024631ENSDART00000033762ENSDART00000151865ENSDARG00000082214ENSDART00000115625ENSDARG00000083999ENSDART00000119399CIL_00051Y_0002ENSG00000140848ENST00000290776ENST00000535318ENST00000565766ENST00000565874ENST00000565951ENST00000566042ENST00000566259ENST00000566910ENST00000567011ENST00000567487ENSG00000140853ENST00000262510ENST00000399221ENST00000436936ENST00000534927ENST00000534931ENST00000535284ENST00000535658ENST00000536231ENST00000537056ENST00000538059ENST00000538110ENST00000538273ENST00000538453ENST00000538778ENST00000538805ENST00000538930ENST00000539144ENST00000539881ENST00000540182ENST00000541020ENST00000543030ENST00000543049ENST00000543103ENST00000543141ENST00000543402ENST00000544189ENST00000544641ENST00000545081ENST00000545349ENSG00000259922ENST00000566704ENSG00000260145ENST00000562970ENSG00000260148ENST00000565829ENSG00000279019ENST00000623921ENSG00000279803ENST00000624886CIL_00051Y_0003ENSMUSG00000034361ENSMUST00000048653ENSMUST00000109537ENSMUST00000136550ENSMUST00000156377ENSMUST00000156894ENSMUSG00000074151ENSMUST00000053085ENSMUST00000098489ENSMUST00000137032ENSMUST00000182409ENSMUST00000183132ENSMUST00000183287
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051Y_0001ENSDARG00000007753ENSDART00000021213ENSDARG00000024631ENSDART00000033762ENSDART00000151865ENSDARG00000082214ENSDART00000115625ENSDARG00000083999ENSDART00000119399CIL_00051Y_0002ENSG00000140848ENST00000290776ENST00000535318ENST00000565766ENST00000565874ENST00000565951ENST00000566042ENST00000566259ENST00000566910ENST00000567487ENSG00000140853ENST00000262510ENST00000399221ENST00000436936ENST00000534927ENST00000536231ENST00000537056ENST00000538273ENST00000538453ENST00000538778ENST00000538805ENST00000539144ENST00000539881ENST00000543030ENST00000543103ENST00000543141ENST00000545081ENST00000545349ENSG00000259922ENST00000566704ENSG00000260145ENST00000562970ENSG00000260148ENST00000565829ENSG00000279019ENST00000623921ENSG00000279803ENST00000624886CIL_00051Y_0003ENSMUSG00000034361ENSMUST00000048653ENSMUST00000109537ENSMUST00000136550ENSMUST00000156377ENSMUST00000156894ENSMUSG00000074151ENSMUST00000053085ENSMUST00000098489ENSMUST00000137032ENSMUST00000182409
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007753 ENSDART00000021213 N/A N/A N/A 11.946±6.46 N/A N/A 0.422±0.12 8.756±1.76 0.088±0.00 N/A N/A N/A N/A N/A
ENSDART00000143475 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000024631 ENSDART00000033762 N/A N/A N/A 0.573±0.22 N/A N/A 1.930±1.03 1.450±0.71 0.076±0.00 N/A 0.465±0.00 N/A N/A N/A
ENSDART00000151865 N/A N/A N/A 0.198±0.00 N/A N/A 1.424±0.21 0.469±0.00 0.225±0.00 N/A 0.687±0.00 N/A N/A N/A
ENSDARG00000082214 ENSDART00000115625 N/A N/A N/A 181.905±0.00 N/A N/A 6.845±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000083999 ENSDART00000119399 N/A N/A N/A 83.187±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140848 ENST00000290776 N/A N/A N/A 1.578±0.00 1.105±0.00 0.872±0.00 N/A N/A N/A N/A 0.687±0.62 2.513±0.00 N/A N/A
ENST00000535318 N/A N/A N/A 7.070±0.00 1.816±0.00 N/A 4.346±0.00 1.965±0.81 2.442±0.00 6.802±0.00 4.284±0.00 12.230±1.55 11.314±4.59 9.904±0.00
ENST00000565766 N/A N/A N/A N/A N/A N/A N/A N/A 1.845±0.00 N/A N/A N/A N/A N/A
ENST00000565874 7.777±0.00 N/A 1.704±0.00 8.601±6.67 16.821±0.00 7.932±6.38 1.326±0.59 8.993±0.00 1.824±0.09 5.684±2.77 5.465±0.00 2.080±1.26 11.076±5.60 5.033±0.19
ENST00000565951 N/A N/A 0.414±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566042 N/A N/A N/A 2.835±0.00 0.570±0.00 N/A 0.197±0.00 0.219±0.00 N/A N/A N/A N/A N/A N/A
ENST00000566259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.296±0.00
ENST00000566910 N/A N/A N/A N/A N/A 8.582±0.00 N/A N/A N/A 8.938±0.00 N/A N/A 7.692±0.00 6.085±0.00
ENST00000567011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.508±0.00 2.109±0.00 N/A N/A
ENSG00000140853 ENST00000262510 N/A N/A N/A 0.194±0.00 1.470±0.88 0.520±0.00 N/A N/A N/A 1.861±0.98 N/A 3.233±0.28 N/A N/A
ENST00000399221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.660±0.00 N/A
ENST00000436936 1.477±0.00 N/A N/A 0.035±0.00 N/A N/A N/A 0.538±0.00 N/A 3.973±0.00 N/A 1.954±0.00 0.387±0.08 N/A
ENST00000534927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.338±0.00 N/A N/A N/A N/A
ENST00000534931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000535658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536231 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.582±0.00 N/A N/A N/A
ENST00000537056 N/A 7.665±0.00 N/A N/A 1.152±0.00 N/A N/A 0.884±0.08 0.951±0.00 N/A N/A 2.193±0.00 0.847±0.00 N/A
ENST00000538059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538273 N/A N/A N/A 0.412±0.00 N/A N/A N/A 2.417±0.00 N/A N/A N/A N/A N/A N/A
ENST00000538453 N/A N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A N/A N/A N/A N/A N/A
ENST00000538778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.487±0.00 N/A N/A N/A
ENST00000538805 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A 0.306±0.00 N/A
ENST00000538930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539144 1.991±0.00 7.157±0.00 N/A 0.508±0.00 0.922±0.00 0.319±0.00 1.024±0.00 0.697±0.00 N/A 5.044±0.00 N/A 1.085±0.00 0.212±0.00 0.513±0.00
ENST00000539881 N/A N/A 0.141±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543030 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A
ENST00000543049 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543103 N/A 11.480±0.00 N/A 0.195±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000543141 N/A N/A N/A N/A 5.687±0.00 N/A N/A N/A N/A 5.409±0.00 1.106±0.33 N/A N/A N/A
ENST00000543402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544189 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000544641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545081 N/A N/A N/A N/A N/A 1.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.747±0.00 N/A N/A N/A
ENSG00000259922 ENST00000566704 0.028±0.00 0.162±0.00 N/A 0.009±0.00 N/A 0.500±0.00 0.017±0.00 N/A N/A N/A N/A 0.082±0.04 N/A 0.057±0.00
ENSG00000260145 ENST00000562970 N/A 0.497±0.00 N/A 0.030±0.00 N/A 0.404±0.00 0.025±0.00 N/A N/A 0.556±0.34 N/A 0.070±0.03 N/A 0.093±0.01
ENSG00000260148 ENST00000565829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.046±0.00
ENSG00000279019 ENST00000623921 0.077±0.00 0.265±0.00 N/A 0.517±0.42 0.316±0.13 N/A 0.041±0.00 N/A 0.041±0.03 N/A 0.033±0.00 0.091±0.03 N/A 0.041±0.02
ENSG00000279803 ENST00000624886 0.279±0.00 0.738±0.00 N/A 1.185±1.01 0.538±0.36 0.120±0.01 0.087±0.03 0.071±0.00 0.091±0.00 0.229±0.18 0.067±0.00 0.331±0.16 0.158±0.04 0.300±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034361 ENSMUST00000048653 13.640±4.01 6.868±2.77 6.975±0.69 4.826±1.99 10.411±5.09 17.351±2.67 1.573±0.70 5.940±0.67 2.388±1.05 3.979±1.63 1.402±0.51 5.809±1.66 1.359±0.61 0.337±0.10
ENSMUST00000109537 10.226±5.78 2.799±0.00 3.871±0.35 2.634±0.60 7.960±1.42 N/A 0.931±0.12 1.821±0.00 0.496±0.18 1.713±0.54 0.918±0.52 1.898±0.45 0.675±0.32 0.383±0.15
ENSMUST00000136550 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.296±0.16
ENSMUST00000156377 27.763±0.00 10.830±1.50 N/A 7.179±0.00 17.830±3.87 18.674±4.24 2.339±0.00 5.558±1.15 2.446±0.89 6.250±2.15 N/A 10.117±2.55 1.650±0.53 0.859±0.22
ENSMUST00000156894 N/A 33.911±10.92 N/A N/A N/A 17.009±0.00 N/A N/A N/A N/A N/A 11.765±1.53 N/A N/A
ENSMUSG00000074151 ENSMUST00000053085 4.579±1.90 1.249±0.62 2.110±0.49 0.042±0.02 8.274±1.66 0.367±0.20 0.524±0.15 0.769±0.27 1.001±0.93 2.014±0.86 0.224±0.01 0.919±0.48 N/A N/A
ENSMUST00000098489 N/A N/A 2.469±0.00 0.072±0.02 6.795±1.81 N/A N/A N/A 1.673±1.51 2.494±0.00 0.364±0.15 1.449±0.00 1.260±0.31 0.885±0.06
ENSMUST00000137032 N/A 2.643±0.32 4.541±0.00 0.036±0.00 N/A N/A N/A N/A 0.238±0.20 N/A 0.193±0.00 N/A 0.293±0.00 N/A
ENSMUST00000182409 N/A 0.907±0.00 N/A N/A N/A N/A N/A 0.331±0.00 0.762±0.00 1.107±0.00 0.364±0.00 0.711±0.23 N/A N/A
ENSMUST00000183132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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