C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: growth regulation by estrogen in breast cancer-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141449 GREB1L 9606 + 18:21242242-21525417 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269218 GREB1L-010 21242358-21522821 protein_coding
  ENST00000424526 GREB1L-201 21242242-21522830 protein_coding
  ENST00000578368 GREB1L-001 21366041-21468884 processed_transcript
  ENST00000578383 GREB1L-008 21485369-21490231 retained_intron
  ENST00000578955 GREB1L-007 21451099-21508715 retained_intron
  ENST00000579454 GREB1L-005 21401226-21441407 protein_coding
  ENST00000580384 GREB1L-009 21513903-21520739 protein_coding
  ENST00000580683 GREB1L-011 21449741-21451370 retained_intron
  ENST00000580732 GREB1L-003 21363593-21525417 protein_coding
  ENST00000581327 GREB1L-006 21449635-21452433 protein_coding
  ENST00000584446 GREB1L-004 21242242-21455130 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartLungMuscleOvaryTestisENST00000269218ENST00000424526ENST00000578368ENST00000578955ENST00000580732ENST00000581327
Transcript ID Brain Breast Colon Heart Lung Muscle Ovary Testis
ENST00000269218 0.365±0.00 N/A N/A N/A N/A N/A 0.493±0.00 N/A
ENST00000424526 N/A 0.169±0.00 N/A 0.175±0.00 N/A N/A N/A 0.517±0.00
ENST00000578368 0.533±0.00 0.156±0.00 0.246±0.00 N/A N/A N/A 2.100±0.00 N/A
ENST00000578955 N/A N/A N/A N/A 0.087±0.00 0.203±0.00 N/A N/A
ENST00000580732 N/A N/A N/A 0.236±0.00 N/A 0.142±0.00 N/A 0.278±0.00
ENST00000581327 N/A N/A 0.461±0.34 N/A N/A 0.697±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O1 CIL_0005O1_0001 CGP 18:20946906-21525417
CIL_0005NU CIL_0005NU_0001 CGP 18:21242242-21600884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000042942 Greb1l growth regulation by estrogen in breast cancer-like protein_coding Mus_musculus

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