C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: growth regulation by estrogen in breast cancer-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424526 GREB1L-201 ENSG00000141449 9606 + 18:21242242-21522830 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartTestisENST00000424526
Transcript ID Breast Heart Testis
ENST00000424526 0.169±0.00 0.175±0.00 0.517±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005O1 CIL_0005O1_0001 CGP 18:20946906-21525417
CIL_0005NU CIL_0005NU_0001 CGP 18:21242242-21600884

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048977 Greb1l-001 protein_coding Mus_musculus 0 6695
ENSMUST00000172680 Greb1l-004 nonsense_mediated_decay Mus_musculus 0 2451
ENSMUST00000172532 Greb1l-003 protein_coding Mus_musculus 0 1925
ENSMUST00000173356 Greb1l-002 retained_intron Mus_musculus 0 1336
ENSMUST00000174553 Greb1l-005 retained_intron Mus_musculus 0 628
ENSMUST00000173261 Greb1l-006 processed_transcript Mus_musculus 0 621
ENSDART00000057268 greb1l-201 protein_coding Danio_rerio 0 213
ENSDART00000138562 greb1l-001 protein_coding Danio_rerio 0 213

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