C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000585873 ZCCHC2-001 ENSG00000141664 9606 + 18:62523667-62586729 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000585873
Transcript ID Bladder Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000585873 0.227±0.00 0.858±0.00 0.356±0.00 0.855±0.00 0.441±0.00 0.550±0.00 4.940±0.00 0.839±0.00 3.582±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076G CIL_00076G_0001 CGP 18:62325287-62587709
CIL_00076H CIL_00076H_0001 CGP 18:62523007-62980433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0008270 IEA zinc ion binding
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118196 Zcchc2-001 protein_coding Mus_musculus 0 3967
ENSMUST00000119166 Zcchc2-002 protein_coding Mus_musculus 0 3722
ENSMUST00000186983 Zcchc2-004 protein_coding Mus_musculus 0 2191
ENSMUST00000188954 Zcchc2-005 protein_coding Mus_musculus 0 508
ENSMUST00000131830 Zcchc2-003 nonsense_mediated_decay Mus_musculus 0 405

Loading