C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000586834 ZCCHC2-004 ENSG00000141664 9606 + 18:62539514-62578579 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungMuscleOvaryTestisENST00000586834
Transcript ID Bladder Breast Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000586834 0.498±0.00 1.344±0.00 0.684±0.00 0.556±0.00 0.793±0.15 2.533±0.00 0.361±0.00 1.345±0.00 5.928±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076G CIL_00076G_0001 CGP 18:62325287-62587709
CIL_00076H CIL_00076H_0001 CGP 18:62523007-62980433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118196 Zcchc2-001 protein_coding Mus_musculus 0 3398
ENSMUST00000119166 Zcchc2-002 protein_coding Mus_musculus 0 2907
ENSMUST00000186983 Zcchc2-004 protein_coding Mus_musculus 0 2191
ENSMUST00000188954 Zcchc2-005 protein_coding Mus_musculus 0 508
ENSMUST00000131830 Zcchc2-003 nonsense_mediated_decay Mus_musculus 0 405

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