C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366661 TTC13-001 ENSG00000143643 9606 - 1:230906243-230978838 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366661
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366661 1.249±0.00 2.308±0.00 1.914±0.00 2.792±0.00 1.034±0.65 0.814±0.53 0.864±0.04 1.819±0.00 3.408±2.88 1.495±0.79 1.799±0.37 0.645±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000613 CIL_000613_0001 CGP 1:230837119-230978875
CIL_000614 CIL_000614_0001 CGP 1:230906243-231000595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118134 Ttc13-003 protein_coding Mus_musculus 0 1868
ENSMUST00000041614 Ttc13-001 protein_coding Mus_musculus 0 1594
ENSMUST00000117624 Ttc13-002 protein_coding Mus_musculus 0 1591
ENSMUST00000127167 Ttc13-004 retained_intron Mus_musculus 0 372
ENSMUST00000130344 Ttc13-008 retained_intron Mus_musculus 0 261
ENSMUST00000140350 Ttc13-005 retained_intron Mus_musculus 0 261
ENSMUST00000131633 Ttc13-006 retained_intron Mus_musculus 0 250
ENSMUST00000126674 Ttc13-009 retained_intron Mus_musculus 1.4013e-45 189
ENSMUST00000128390 Ttc13-007 retained_intron Mus_musculus 9.99967e-42 176

Loading