C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000366662 TTC13-002 ENSG00000143643 9606 - 1:230906243-230978859 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyPlacentaTestisENST00000366662
Transcript ID Adipose Bladder Brain Breast Kidney Placenta Testis
ENST00000366662 0.383±0.00 0.178±0.00 1.381±0.00 0.684±0.00 0.664±0.06 0.309±0.00 0.324±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000613 CIL_000613_0001 CGP 1:230837119-230978875
CIL_000614 CIL_000614_0001 CGP 1:230906243-231000595

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118134 Ttc13-003 protein_coding Mus_musculus 0 2218
ENSMUST00000041614 Ttc13-001 protein_coding Mus_musculus 0 1574
ENSMUST00000117624 Ttc13-002 protein_coding Mus_musculus 0 1570
ENSMUST00000127167 Ttc13-004 retained_intron Mus_musculus 0 370
ENSMUST00000130344 Ttc13-008 retained_intron Mus_musculus 0 261
ENSMUST00000140350 Ttc13-005 retained_intron Mus_musculus 0 261
ENSMUST00000131633 Ttc13-006 retained_intron Mus_musculus 0 250
ENSMUST00000126674 Ttc13-009 retained_intron Mus_musculus 1.4013e-45 189
ENSMUST00000128390 Ttc13-007 retained_intron Mus_musculus 9.99967e-42 176

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