C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sideroflexin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272433 SFXN5-001 ENSG00000144040 9606 - 2:72942036-73071836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLiverMuscleOvaryPlacentaENST00000272433
Transcript ID Brain Colon Kidney Liver Muscle Ovary Placenta
ENST00000272433 5.699±0.00 0.803±0.00 8.098±0.09 2.466±1.77 0.144±0.00 3.544±0.00 1.616±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087O CIL_00087O_0001 VISTA 2:72597601-73198962
CIL_0008RW CIL_0008RW_0001 VISTA 2:72647671-73248640
CIL_0002DU CIL_0002DU_0002 CGP 2:72916260-73075619
CIL_0002DT CIL_0002DT_0002 CGP 2:72942036-73156721

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005743 IEA mitochondrial inner membrane
GO:0006811 IEA ion transport
GO:0008324 IEA cation transmembrane transporter activity
GO:0015075 IEA ion transmembrane transporter activity
GO:0015137 IEA citrate transmembrane transporter activity
GO:0015746 IEA citrate transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055072 IEA iron ion homeostasis
GO:0055085 IEA transmembrane transport
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000045846 Sfxn5-001 protein_coding Mus_musculus 0 1343
ENSMUST00000059034 Sfxn5-003 protein_coding Mus_musculus 0 1055
ENSMUST00000148179 Sfxn5-007 processed_transcript Mus_musculus 0 582
ENSDART00000144464 sfxn5a-001 protein_coding Danio_rerio 0 235

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