C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hes family bHLH transcription factor 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144485 HES6 9606 - 2:238238267-238240662 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000272937 HES6-001 238238267-238240124 protein_coding
  ENST00000409002 HES6-002 238238276-238239971 protein_coding
  ENST00000409160 HES6-003 238238270-238240038 protein_coding
  ENST00000409182 HES6-006 238238605-238239958 protein_coding
  ENST00000409356 HES6-007 238239170-238240024 protein_coding
  ENST00000409574 HES6-005 238238860-238240041 protein_coding
  ENST00000417803 HES6-009 238238776-238239671 protein_coding
  ENST00000436051 HES6-004 238239180-238240662 protein_coding
  ENST00000450098 HES6-008 238239216-238240001 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272937ENST00000409002ENST00000409160ENST00000409182ENST00000409356ENST00000409574ENST00000417803
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272937 N/A N/A N/A N/A 1.119±0.00 0.673±0.00 N/A N/A N/A 0.340±0.00 N/A 5.506±0.00 1.237±0.37 N/A
ENST00000409002 0.871±0.00 2.196±0.00 0.186±0.00 11.075±5.23 0.869±0.00 6.084±0.00 N/A N/A 0.922±0.47 3.545±0.00 1.178±0.00 6.459±2.58 0.611±0.00 7.727±0.30
ENST00000409160 N/A 0.628±0.00 N/A 0.651±0.00 0.370±0.00 1.135±0.59 0.925±0.00 1.108±0.00 N/A N/A N/A 4.136±4.88 N/A 2.853±0.00
ENST00000409182 N/A 0.781±0.00 N/A N/A N/A N/A 0.192±0.00 N/A N/A N/A N/A 1.748±0.00 0.534±0.00 10.982±0.00
ENST00000409356 N/A N/A N/A N/A N/A 0.529±0.00 2.192±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000409574 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.322±0.00 0.712±0.00 N/A N/A N/A
ENST00000417803 0.864±0.00 N/A N/A N/A N/A 0.652±0.00 N/A 2.355±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006X3 CIL_0006X3_0001 CGP 2:238170401-238240662
CIL_0004KS CIL_0004KS_0002 CGP 2:238238267-238290102

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003712 ISS transcription cofactor activity
GO:0005634 IEA nucleus
GO:0005667 ISS transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0007399 IEA nervous system development
GO:0008134 NAS transcription factor binding
GO:0030154 IEA cell differentiation
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007097 her13 hairy-related 13 protein_coding Danio_rerio
ENSDARG00000019335 hes6 hairy and enhancer of split 6 (Drosophila) protein_coding Danio_rerio
ENSMUSG00000067071 Hes6 hairy and enhancer of split 6 protein_coding Mus_musculus

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