C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hairy and enhancer of split 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000067071 Hes6 10090 - 1:91411483-91414038 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000086851 Hes6-001 91411483-91413222 protein_coding
  ENSMUST00000126136 Hes6-005 91411483-91413222 retained_intron
  ENSMUST00000132188 Hes6-004 91411483-91413208 retained_intron
  ENSMUST00000150520 Hes6-002 91412348-91414038 processed_transcript
  ENSMUST00000155752 Hes6-003 91412287-91413208 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086851ENSMUST00000126136ENSMUST00000132188ENSMUST00000150520ENSMUST00000155752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086851 8.930±1.58 73.972±15.21 7.685±0.63 30.914±20.62 9.032±3.30 41.944±3.09 5.561±3.53 23.790±0.43 27.136±16.06 13.022±2.84 3.882±0.80 16.701±4.14 7.672±2.41 1.467±0.45
ENSMUST00000126136 5.208±1.21 40.275±5.17 4.536±1.31 19.056±16.63 8.179±3.26 21.179±1.82 2.095±0.71 4.839±0.44 5.552±1.75 8.734±1.44 1.054±0.35 7.238±1.81 1.628±0.63 0.622±0.26
ENSMUST00000132188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.337±0.00
ENSMUST00000150520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.135±3.48 N/A N/A
ENSMUST00000155752 N/A 43.317±2.93 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D3 CIL_0008D3_0002 VISTA 1:90908179-91512308
CIL_0006X3 CIL_0006X3_0002 CGP 1:91373861-91414038
CIL_0004KS CIL_0004KS_0003 CGP 1:91411483-91459324

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0003712 IDA transcription cofactor activity
GO:0005634 IEA nucleus
GO:0005667 IDA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006357 IMP regulation of transcription from RNA polymerase II promoter
GO:0007399 IMP nervous system development
GO:0008134 NAS transcription factor binding
GO:0030154 IDA cell differentiation
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007097 her13 hairy-related 13 protein_coding Danio_rerio
ENSDARG00000019335 hes6 hairy and enhancer of split 6 (Drosophila) protein_coding Danio_rerio
ENSG00000144485 HES6 hes family bHLH transcription factor 6 protein_coding Homo_sapiens

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