C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and immunoglobulin-like domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000144749 LRIG1 9606 - 3:66378797-66501263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000273261 LRIG1-001 66378797-66500932 protein_coding
  ENST00000383703 LRIG1-002 66378797-66501011 protein_coding
  ENST00000475366 LRIG1-007 66414958-66498259 processed_transcript
  ENST00000491821 LRIG1-010 66409754-66412931 retained_intron
  ENST00000495037 LRIG1-005 66380225-66404410 processed_transcript
  ENST00000495671 LRIG1-008 66451558-66469245 processed_transcript
  ENST00000496559 LRIG1-004 66378798-66406213 processed_transcript
  ENST00000497721 LRIG1-009 66410151-66417632 processed_transcript
  ENST00000498287 LRIG1-006 66412926-66501263 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000273261ENST00000383703ENST00000496559
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000273261 6.339±0.00 3.849±0.00 0.286±0.00 8.617±6.28 5.800±0.34 7.789±0.20 17.795±13.82 4.853±0.00 3.317±0.17 9.110±4.40 6.825±5.26 5.919±2.26 1.746±0.68 4.036±0.51
ENST00000383703 N/A N/A N/A 1.227±0.00 2.029±0.00 N/A N/A N/A N/A 4.503±0.00 N/A N/A N/A N/A
ENST00000496559 N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034P CIL_00034P_0001 CGP 3:65353525-66388116
CIL_0003RB CIL_0003RB_0002 CGP 3:66133610-66501263
CIL_0009B3 CIL_0009B3_0001 VISTA 3:66275404-66878578
CIL_0003RC CIL_0003RC_0002 CGP 3:66378797-67011210

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0007605 IEA sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0032474 IEA otolith morphogenesis
GO:0060384 IEA innervation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075625 lrig1 leucine-rich repeats and immunoglobulin-like domains 1 protein_coding Danio_rerio
ENSMUSG00000030029 Lrig1 leucine-rich repeats and immunoglobulin-like domains 1 protein_coding Mus_musculus

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