C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine-rich repeats and immunoglobulin-like domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030029 Lrig1 10090 - 6:94604529-94700158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032105 Lrig1-001 94604529-94700158 protein_coding
  ENSMUST00000101126 Lrig1-002 94604536-94700137 protein_coding
  ENSMUST00000124165 Lrig1-005 94628075-94678865 processed_transcript
  ENSMUST00000141014 Lrig1-004 94625034-94680630 processed_transcript
  ENSMUST00000150811 Lrig1-003 94626450-94655525 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032105ENSMUST00000101126
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032105 6.242±2.53 6.108±0.99 1.298±0.24 3.502±0.28 12.009±6.37 34.686±3.30 3.207±1.07 1.902±0.73 2.288±1.37 7.295±2.13 5.999±0.00 25.615±5.01 1.950±0.67 0.859±0.24
ENSMUST00000101126 4.490±1.37 N/A 2.922±0.21 3.543±1.92 5.123±2.13 7.722±1.27 2.815±0.05 1.558±0.65 1.315±0.35 2.786±0.84 8.593±3.68 5.147±1.25 1.837±0.46 0.902±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00034P CIL_00034P_0002 CGP 6:93675455-94604648
CIL_0009B3 CIL_0009B3_0002 VISTA 6:94453098-95057440
CIL_0003RB CIL_0003RB_0003 CGP 6:94500314-94700158
CIL_0003RC CIL_0003RC_0003 CGP 6:94604529-95129718

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007605 IMP sensory perception of sound
GO:0016021 IEA integral component of membrane
GO:0032474 IGI otolith morphogenesis
GO:0060384 IGI innervation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000075625 lrig1 leucine-rich repeats and immunoglobulin-like domains 1 protein_coding Danio_rerio
ENSG00000144749 LRIG1 leucine-rich repeats and immunoglobulin-like domains 1 protein_coding Homo_sapiens

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