C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058208-ENSDARG00000075625 CGP 7955 11:16601574-16779636
GeneTranscriptPositionBiotype
ENSDARG00000058208 (slc25a26)
solute carrier family 25, member 26 		ENSDART00000081035 (slc25a26-001) 16601574-16709240 protein_coding
ENSDART00000147190 (slc25a26-002) 16601629-16666940 protein_coding
ENSDARG00000075625 (lrig1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENSDART00000115085 (lrig1-201) 16714442-16779636 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003RB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144741-ENSG00000144749 CGP 9606 3:66133610-66501263
GeneTranscriptPositionBiotype
ENSG00000144741 (SLC25A26)
solute carrier family 25 (S-adenosylmethionine carrier), member 26 		ENST00000336733 (SLC25A26-006) 66221012-66378079 protein_coding
ENST00000354883 (SLC25A26-001) 66133610-66378927 protein_coding
ENST00000413054 (SLC25A26-002) 66243203-66378056 protein_coding
ENST00000464350 (SLC25A26-003) 66221064-66388116 nonsense_mediated_decay
ENST00000483224 (SLC25A26-004) 66243203-66378927 nonsense_mediated_decay
ENST00000484768 (SLC25A26-005) 66261595-66370584 processed_transcript
ENSG00000144749 (LRIG1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENST00000273261 (LRIG1-001) 66378797-66500932 protein_coding
ENST00000383703 (LRIG1-002) 66378797-66501011 protein_coding
ENST00000475366 (LRIG1-007) 66414958-66498259 processed_transcript
ENST00000491821 (LRIG1-010) 66409754-66412931 retained_intron
ENST00000495037 (LRIG1-005) 66380225-66404410 processed_transcript
ENST00000495671 (LRIG1-008) 66451558-66469245 processed_transcript
ENST00000496559 (LRIG1-004) 66378798-66406213 processed_transcript
ENST00000497721 (LRIG1-009) 66410151-66417632 processed_transcript
ENST00000498287 (LRIG1-006) 66412926-66501263 processed_transcript
ENSG00000206759 (RNU6-787P)
RNA, U6 small nuclear 787, pseudogene 		ENST00000384032 (RNU6-787P-201) 66293114-66293220 snRNA
ENSG00000241587 (RN7SL482P)
RNA, 7SL, cytoplasmic 482, pseudogene 		ENST00000487928 (RN7SL482P-201) 66323855-66324152 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0003RB_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045100-ENSMUSG00000030029 CGP 10090 6:94500314-94700158
GeneTranscriptPositionBiotype
ENSMUSG00000030029 (Lrig1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENSMUST00000032105 (Lrig1-001) 94604529-94700158 protein_coding
ENSMUST00000101126 (Lrig1-002) 94604536-94700137 protein_coding
ENSMUST00000124165 (Lrig1-005) 94628075-94678865 processed_transcript
ENSMUST00000141014 (Lrig1-004) 94625034-94680630 processed_transcript
ENSMUST00000150811 (Lrig1-003) 94626450-94655525 processed_transcript
ENSMUSG00000045100 (Slc25a26)
solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 		ENSMUST00000061118 (Slc25a26-201) 94500314-94604648 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RB_0001ENSDARG00000058208ENSDART00000081035ENSDART00000147190ENSDARG00000075625ENSDART00000115085CIL_0003RB_0002ENSG00000144741ENST00000336733ENST00000354883ENST00000413054ENST00000464350ENST00000483224ENST00000484768ENSG00000144749ENST00000273261ENST00000383703ENST00000475366ENST00000491821ENST00000495037ENST00000495671ENST00000496559ENST00000497721ENST00000498287ENSG00000206759ENST00000384032ENSG00000241587ENST00000487928CIL_0003RB_0003ENSMUSG00000030029ENSMUST00000032105ENSMUST00000101126ENSMUST00000124165ENSMUST00000141014ENSMUST00000150811ENSMUSG00000045100ENSMUST00000061118
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RB_0001ENSDARG00000058208ENSDART00000081035ENSDARG00000075625ENSDART00000115085CIL_0003RB_0002ENSG00000144741ENST00000336733ENST00000354883ENST00000483224ENSG00000144749ENST00000273261ENST00000383703ENST00000496559ENSG00000206759ENST00000384032ENSG00000241587ENST00000487928CIL_0003RB_0003ENSMUSG00000030029ENSMUST00000032105ENSMUST00000101126ENSMUSG00000045100ENSMUST00000061118
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058208 ENSDART00000081035 N/A N/A N/A 1.910±1.66 N/A N/A 14.943±0.14 5.247±0.00 3.959±0.00 N/A 7.061±0.00 N/A N/A N/A
ENSDART00000147190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000075625 ENSDART00000115085 N/A N/A N/A 2.445±0.19 N/A N/A 5.812±1.67 2.062±0.20 0.799±0.00 N/A 1.735±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144741 ENST00000336733 10.953±0.00 11.852±0.00 2.737±0.00 8.796±0.00 N/A N/A N/A 11.471±4.41 9.680±0.00 N/A 9.039±0.00 18.151±0.91 12.323±2.80 18.519±3.31
ENST00000354883 N/A 3.220±0.00 0.646±0.00 N/A N/A N/A N/A N/A 1.922±0.00 N/A N/A N/A N/A N/A
ENST00000413054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.896±0.00 N/A
ENST00000484768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144749 ENST00000273261 6.339±0.00 3.849±0.00 0.286±0.00 8.617±6.28 5.800±0.34 7.789±0.20 17.795±13.82 4.853±0.00 3.317±0.17 9.110±4.40 6.825±5.26 5.919±2.26 1.746±0.68 4.036±0.51
ENST00000383703 N/A N/A N/A 1.227±0.00 2.029±0.00 N/A N/A N/A N/A 4.503±0.00 N/A N/A N/A N/A
ENST00000475366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496559 N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206759 ENST00000384032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.174±0.00
ENSG00000241587 ENST00000487928 0.112±0.00 N/A N/A 0.258±0.00 0.440±0.00 1.519±0.00 0.329±0.00 N/A 0.108±0.00 N/A N/A 0.134±0.00 N/A 0.263±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030029 ENSMUST00000032105 6.242±2.53 6.108±0.99 1.298±0.24 3.502±0.28 12.009±6.37 34.686±3.30 3.207±1.07 1.902±0.73 2.288±1.37 7.295±2.13 5.999±0.00 25.615±5.01 1.950±0.67 0.859±0.24
ENSMUST00000101126 4.490±1.37 N/A 2.922±0.21 3.543±1.92 5.123±2.13 7.722±1.27 2.815±0.05 1.558±0.65 1.315±0.35 2.786±0.84 8.593±3.68 5.147±1.25 1.837±0.46 0.902±0.16
ENSMUST00000124165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000045100 ENSMUST00000061118 9.296±0.41 10.936±0.99 4.763±0.75 5.747±1.66 N/A N/A 7.187±2.76 9.772±1.17 3.837±1.24 N/A 11.064±0.82 5.773±0.37 3.401±0.64 9.893±2.86

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