C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000075625-ENSDARG00000070698 CGP 7955 11:16714442-16968922
GeneTranscriptPositionBiotype
ENSDARG00000070698 (kbtbd8)
kelch repeat and BTB (POZ) domain containing 8 		ENSDART00000104072 (kbtbd8-001) 16959290-16968922 protein_coding
ENSDARG00000075625 (lrig1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENSDART00000115085 (lrig1-201) 16714442-16779636 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003RC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144749-ENSG00000163376 CGP 9606 3:66378797-67011210
GeneTranscriptPositionBiotype
ENSG00000144741 (SLC25A26)
solute carrier family 25 (S-adenosylmethionine carrier), member 26 		ENST00000336733 (SLC25A26-006) 66221012-66378079 protein_coding
ENST00000354883 (SLC25A26-001) 66133610-66378927 protein_coding
ENST00000413054 (SLC25A26-002) 66243203-66378056 protein_coding
ENST00000464350 (SLC25A26-003) 66221064-66388116 nonsense_mediated_decay
ENST00000483224 (SLC25A26-004) 66243203-66378927 nonsense_mediated_decay
ENST00000484768 (SLC25A26-005) 66261595-66370584 processed_transcript
ENSG00000144749 (LRIG1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENST00000273261 (LRIG1-001) 66378797-66500932 protein_coding
ENST00000383703 (LRIG1-002) 66378797-66501011 protein_coding
ENST00000475366 (LRIG1-007) 66414958-66498259 processed_transcript
ENST00000491821 (LRIG1-010) 66409754-66412931 retained_intron
ENST00000495037 (LRIG1-005) 66380225-66404410 processed_transcript
ENST00000495671 (LRIG1-008) 66451558-66469245 processed_transcript
ENST00000496559 (LRIG1-004) 66378798-66406213 processed_transcript
ENST00000497721 (LRIG1-009) 66410151-66417632 processed_transcript
ENST00000498287 (LRIG1-006) 66412926-66501263 processed_transcript
ENSG00000163376 (KBTBD8)
kelch repeat and BTB (POZ) domain containing 8 		ENST00000417314 (KBTBD8-001) 66998307-67011210 protein_coding
ENST00000460576 (KBTBD8-002) 66998307-67008840 protein_coding
ENST00000460784 (KBTBD8-006) 66998925-67003484 protein_coding
ENST00000469661 (KBTBD8-005) 66998307-67003828 processed_transcript
ENST00000484414 (KBTBD8-004) 66998307-67003697 protein_coding
ENSG00000214560 (RPL21P41)
ribosomal protein L21 pseudogene 41 		ENST00000459863 (RPL21P41-001) 66637149-66637412 processed_pseudogene
ENSG00000271174 (RP11-814M22.2)
 ENST00000605010 (RP11-814M22.2-001) 66622760-66623102 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0003RC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030029-ENSMUSG00000030031 CGP 10090 6:94604529-95129718
GeneTranscriptPositionBiotype
ENSMUSG00000030029 (Lrig1)
leucine-rich repeats and immunoglobulin-like domains 1 		ENSMUST00000032105 (Lrig1-001) 94604529-94700158 protein_coding
ENSMUST00000101126 (Lrig1-002) 94604536-94700137 protein_coding
ENSMUST00000124165 (Lrig1-005) 94628075-94678865 processed_transcript
ENSMUST00000141014 (Lrig1-004) 94625034-94680630 processed_transcript
ENSMUST00000150811 (Lrig1-003) 94626450-94655525 processed_transcript
ENSMUSG00000030031 (Kbtbd8)
kelch repeat and BTB (POZ) domain containing 8 		ENSMUST00000032107 (Kbtbd8-001) 95117740-95129656 protein_coding
ENSMUST00000119582 (Kbtbd8-002) 95117880-95129718 protein_coding
ENSMUST00000122938 (Kbtbd8-003) 95117240-95121890 processed_transcript
ENSMUST00000145387 (Kbtbd8-004) 95117984-95121797 processed_transcript
ENSMUSG00000045100 (Slc25a26)
solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26 		ENSMUST00000061118 (Slc25a26-201) 94500314-94604648 protein_coding
ENSMUSG00000085413 (Kbtbd8os)
kelch repeat and BTB (POZ) domain containing 8, opposite strand 		ENSMUST00000135145 (Kbtbd8os-001) 95114017-95117631 antisense
ENSMUSG00000097943 (Gm7833)
predicted gene 7833 		ENSMUST00000183288 (Gm7833-001) 94820530-94821519 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RC_0001ENSDARG00000070698ENSDART00000104072ENSDARG00000075625ENSDART00000115085CIL_0003RC_0002ENSG00000144741ENST00000336733ENST00000354883ENST00000413054ENST00000464350ENST00000483224ENST00000484768ENSG00000144749ENST00000273261ENST00000383703ENST00000475366ENST00000491821ENST00000495037ENST00000495671ENST00000496559ENST00000497721ENST00000498287ENSG00000163376ENST00000417314ENST00000460576ENST00000460784ENST00000469661ENST00000484414ENSG00000214560ENST00000459863ENSG00000271174ENST00000605010CIL_0003RC_0003ENSMUSG00000030029ENSMUST00000032105ENSMUST00000101126ENSMUST00000124165ENSMUST00000141014ENSMUST00000150811ENSMUSG00000030031ENSMUST00000032107ENSMUST00000119582ENSMUST00000122938ENSMUST00000145387ENSMUSG00000045100ENSMUST00000061118ENSMUSG00000085413ENSMUST00000135145ENSMUSG00000097943ENSMUST00000183288
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RC_0001ENSDARG00000070698ENSDART00000104072ENSDARG00000075625ENSDART00000115085CIL_0003RC_0002ENSG00000144741ENST00000336733ENST00000354883ENST00000483224ENSG00000144749ENST00000273261ENST00000383703ENST00000496559ENSG00000163376ENST00000417314ENST00000460576ENST00000460784ENST00000484414ENSG00000214560ENST00000459863ENSG00000271174ENST00000605010CIL_0003RC_0003ENSMUSG00000030029ENSMUST00000032105ENSMUST00000101126ENSMUSG00000030031ENSMUST00000032107ENSMUST00000119582ENSMUST00000122938ENSMUST00000145387ENSMUSG00000045100ENSMUST00000061118ENSMUSG00000085413ENSMUST00000135145ENSMUSG00000097943ENSMUST00000183288
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000070698 ENSDART00000104072 N/A N/A N/A 1.046±0.00 N/A N/A 1.300±0.05 1.272±0.00 0.705±0.00 N/A 1.080±0.00 N/A N/A N/A
ENSDARG00000075625 ENSDART00000115085 N/A N/A N/A 2.445±0.19 N/A N/A 5.812±1.67 2.062±0.20 0.799±0.00 N/A 1.735±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000144741 ENST00000336733 10.953±0.00 11.852±0.00 2.737±0.00 8.796±0.00 N/A N/A N/A 11.471±4.41 9.680±0.00 N/A 9.039±0.00 18.151±0.91 12.323±2.80 18.519±3.31
ENST00000354883 N/A 3.220±0.00 0.646±0.00 N/A N/A N/A N/A N/A 1.922±0.00 N/A N/A N/A N/A N/A
ENST00000413054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.896±0.00 N/A
ENST00000484768 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144749 ENST00000273261 6.339±0.00 3.849±0.00 0.286±0.00 8.617±6.28 5.800±0.34 7.789±0.20 17.795±13.82 4.853±0.00 3.317±0.17 9.110±4.40 6.825±5.26 5.919±2.26 1.746±0.68 4.036±0.51
ENST00000383703 N/A N/A N/A 1.227±0.00 2.029±0.00 N/A N/A N/A N/A 4.503±0.00 N/A N/A N/A N/A
ENST00000475366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496559 N/A N/A 0.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497721 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163376 ENST00000417314 0.036±0.00 0.268±0.00 N/A 0.291±0.19 0.042±0.00 0.498±0.00 0.312±0.16 0.066±0.00 N/A 1.085±0.00 0.043±0.00 0.027±0.00 0.200±0.00 0.979±0.34
ENST00000460576 N/A N/A N/A N/A 0.458±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460784 N/A N/A 0.136±0.00 N/A 0.674±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469661 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484414 N/A N/A N/A 2.365±0.00 N/A 2.222±0.00 N/A N/A N/A N/A 1.161±0.00 N/A N/A 7.565±0.00
ENSG00000214560 ENST00000459863 N/A 0.602±0.00 N/A 0.050±0.00 0.097±0.00 0.045±0.00 0.095±0.00 0.048±0.00 0.182±0.00 0.184±0.00 0.137±0.00 1.317±0.00 N/A 0.090±0.00
ENSG00000271174 ENST00000605010 N/A N/A N/A 0.411±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.420±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030029 ENSMUST00000032105 6.242±2.53 6.108±0.99 1.298±0.24 3.502±0.28 12.009±6.37 34.686±3.30 3.207±1.07 1.902±0.73 2.288±1.37 7.295±2.13 5.999±0.00 25.615±5.01 1.950±0.67 0.859±0.24
ENSMUST00000101126 4.490±1.37 N/A 2.922±0.21 3.543±1.92 5.123±2.13 7.722±1.27 2.815±0.05 1.558±0.65 1.315±0.35 2.786±0.84 8.593±3.68 5.147±1.25 1.837±0.46 0.902±0.16
ENSMUST00000124165 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141014 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030031 ENSMUST00000032107 0.195±0.10 0.160±0.01 0.306±0.10 0.692±0.33 0.380±0.15 0.204±0.15 0.185±0.05 0.189±0.07 0.901±0.88 0.367±0.06 0.384±0.05 0.718±0.44 0.691±0.50 1.327±0.55
ENSMUST00000119582 0.160±0.00 0.221±0.04 0.164±0.00 0.218±0.04 0.237±0.10 0.367±0.05 N/A 0.226±0.14 0.415±0.33 0.220±0.12 0.220±0.19 0.728±0.40 0.470±0.31 0.285±0.00
ENSMUST00000122938 N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A N/A
ENSMUST00000145387 N/A N/A N/A N/A N/A N/A 0.392±0.00 1.018±0.00 N/A N/A N/A N/A N/A N/A
ENSMUSG00000045100 ENSMUST00000061118 9.296±0.41 10.936±0.99 4.763±0.75 5.747±1.66 N/A N/A 7.187±2.76 9.772±1.17 3.837±1.24 N/A 11.064±0.82 5.773±0.37 3.401±0.64 9.893±2.86
ENSMUSG00000085413 ENSMUST00000135145 N/A N/A N/A N/A N/A N/A N/A 0.152±0.01 N/A N/A 0.137±0.02 N/A N/A 3.674±0.00
ENSMUSG00000097943 ENSMUST00000183288 N/A N/A N/A 0.008±0.00 N/A 0.184±0.06 N/A 0.035±0.00 N/A N/A N/A 0.091±0.00 0.021±0.01 0.030±0.00

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