| Transcript ID | Lung | Testis |
|---|---|---|
| ENST00000442201 | 1.028±0.00 | 1.108±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | coiled-coil domain containing 39 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000145075  |
CCDC39 | 9606 | - |
3:180602858-180871005  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000442201 |
CCDC39-001 | 180614588-180679500 | protein_coding | ||
| ENST00000471307 |
CCDC39-003 | 180661872-180870933 | protein_coding | ||
| ENST00000473854 |
CCDC39-006 | 180602858-180616652 | protein_coding | ||
| ENST00000476379 |
CCDC39-002 | 180614008-180737874 | nonsense_mediated_decay | ||
| ENST00000485055 |
CCDC39-004 | 180707589-180870178 | processed_transcript | ||
| ENST00000489868 |
CCDC39-007 | 180609503-180616617 | protein_coding | ||
| ENST00000495817 |
CCDC39-005 | 180708326-180871005 | processed_transcript | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001FH | CIL_0001FH_0001 | CGP | 3:179794958-180617828 |
| CIL_00081N | CIL_00081N_0001 | VISTA | 3:180418639-181020170 |
| CIL_00081O | CIL_00081O_0001 | VISTA | 3:180444037-181045086 |
| CIL_0001FQ | CIL_0001FQ_0001 | CGP | 3:180602130-180871005 |
| CIL_0001FR | CIL_0001FR_0001 | CGP | 3:180602858-180982753 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0001947 | IMP | heart looping |
| GO:0005856 | IEA | cytoskeleton |
| GO:0005930 | IDA | axoneme |
| GO:0030324 | IMP | lung development |
| GO:0035469 | IMP | determination of pancreatic left/right asymmetry |
| GO:0060285 | IMP | cilium-dependent cell motility |
| GO:0060287 | IMP | epithelial cilium movement involved in determination of left/right asymmetry |
| GO:0070286 | IMP | axonemal dynein complex assembly |
| GO:0071907 | IMP | determination of digestive tract left/right asymmetry |
| GO:0071910 | IMP | determination of liver left/right asymmetry |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSDARG00000016485
|
CCDC39 | coiled-coil domain containing 39 | protein_coding | Danio_rerio | |
|
ENSMUSG00000027676
|
Ccdc39 | coiled-coil domain containing 39 | protein_coding | Mus_musculus | |
