C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDK5 regulatory subunit associated protein 1-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000145996 CDKAL1 9606 + 6:20534457-21232404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000274695 CDKAL1-201 20534457-21232404 protein_coding
  ENST00000378610 CDKAL1-001 20546341-21232404 protein_coding
  ENST00000476517 CDKAL1-002 21200812-21231441 processed_transcript
  ENST00000613575 CDKAL1-202 20534481-20559672 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274695ENST00000378610ENST00000613575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274695 2.504±0.00 2.966±0.00 0.757±0.00 1.839±0.10 4.608±3.47 3.750±1.79 2.394±0.81 1.733±0.83 3.497±2.86 4.280±2.95 2.398±0.90 5.035±2.63 2.050±0.94 3.181±1.22
ENST00000378610 1.390±0.00 1.014±0.00 N/A 0.771±0.16 2.482±0.00 0.427±0.00 0.347±0.00 2.075±0.00 0.385±0.00 0.703±0.00 0.571±0.00 3.332±0.00 0.726±0.00 0.818±0.00
ENST00000613575 N/A N/A 0.715±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.555±0.00 N/A 0.992±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0005791 IEA rough endoplasmic reticulum
GO:0008150 ND biological_process
GO:0009451 IEA RNA modification
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0035598 IEA N6-threonylcarbomyladenosine methylthiotransferase activity
GO:0035600 IEA tRNA methylthiolation
GO:0043412 IEA macromolecule modification
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:1990145 IEA maintenance of translational fidelity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022122 cdkal1 CDK5 regulatory subunit associated protein 1-like 1 protein_coding Danio_rerio
ENSMUSG00000006191 Cdkal1 CDK5 regulatory subunit associated protein 1-like 1 protein_coding Mus_musculus

Loading