C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CDK5 regulatory subunit associated protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613575 CDKAL1-202 ENSG00000145996 9606 + 6:20534481-20559672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryTestisENST00000613575
Transcript ID Bladder Ovary Testis
ENST00000613575 0.715±0.00 1.555±0.00 0.992±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009451 IEA RNA modification
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000129231 Cdkal1-009 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000091674 Cdkal1-004 protein_coding Mus_musculus 0 337
ENSMUST00000124532 Cdkal1-010 protein_coding Mus_musculus 0 337
ENSMUST00000123641 Cdkal1-011 retained_intron Mus_musculus 0 337
ENSMUST00000137225 Cdkal1-008 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000153086 Cdkal1-006 retained_intron Mus_musculus 0 337
ENSMUST00000131792 Cdkal1-003 retained_intron Mus_musculus 0 337
ENSMUST00000006353 Cdkal1-001 protein_coding Mus_musculus 0 337
ENSMUST00000140278 Cdkal1-007 nonsense_mediated_decay Mus_musculus 0 337

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