C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK5 regulatory subunit associated protein 1-like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000274695 CDKAL1-201 ENSG00000145996 9606 + 6:20534457-21232404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000274695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000274695 2.504±0.00 2.966±0.00 0.757±0.00 1.839±0.10 4.608±3.47 3.750±1.79 2.394±0.81 1.733±0.83 3.497±2.86 4.280±2.95 2.398±0.90 5.035±2.63 2.050±0.94 3.181±1.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003824 IEA catalytic activity
GO:0005575 ND cellular_component
GO:0005783 IEA endoplasmic reticulum
GO:0005791 IEA rough endoplasmic reticulum
GO:0008150 ND biological_process
GO:0009451 IEA RNA modification
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0035598 IEA N6-threonylcarbomyladenosine methylthiotransferase activity
GO:0035600 IEA tRNA methylthiolation
GO:0043412 IEA macromolecule modification
GO:0046872 IEA metal ion binding
GO:0051536 IEA iron-sulfur cluster binding
GO:0051539 IEA 4 iron, 4 sulfur cluster binding
GO:1990145 IEA maintenance of translational fidelity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006353 Cdkal1-001 protein_coding Mus_musculus 0 1916
ENSMUST00000140278 Cdkal1-007 nonsense_mediated_decay Mus_musculus 0 1877
ENSMUST00000131792 Cdkal1-003 retained_intron Mus_musculus 0 1504
ENSMUST00000153086 Cdkal1-006 retained_intron Mus_musculus 0 1269
ENSMUST00000137225 Cdkal1-008 nonsense_mediated_decay Mus_musculus 0 750
ENSMUST00000123641 Cdkal1-011 retained_intron Mus_musculus 0 634
ENSMUST00000154209 Cdkal1-002 protein_coding Mus_musculus 0 383
ENSMUST00000124532 Cdkal1-010 protein_coding Mus_musculus 0 342
ENSMUST00000129231 Cdkal1-009 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000091674 Cdkal1-004 protein_coding Mus_musculus 0 337
ENSMUST00000110323 Cdkal1-005 protein_coding Mus_musculus 6e-40 171

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