C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 7 open reading frame 43
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316937 C7orf43-001 ENSG00000146826 9606 - 7:100154420-100158685 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungOvaryPlacentaTestisENST00000316937
Transcript ID Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000316937 1.912±0.00 1.072±0.00 1.828±0.51 1.043±0.00 8.362±0.00 7.814±0.91 15.634±7.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QI CIL_0008QI_0001 VISTA 7:99696610-100298804
CIL_0002JK CIL_0002JK_0001 CGP 7:100148907-100158715
CIL_0005BN CIL_0005BN_0002 CGP 7:100154420-100168750

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048421 BC037034-001 protein_coding Mus_musculus 0 2460
ENSMUST00000164203 BC037034-001 protein_coding Mus_musculus 0 2459
ENSMUST00000159649 BC037034-003 protein_coding Mus_musculus 0 1960
ENSMUST00000167840 BC037034-003 protein_coding Mus_musculus 0 1960
ENSMUST00000161604 BC037034-002 protein_coding Mus_musculus 0 1958
ENSMUST00000163268 BC037034-005 protein_coding Mus_musculus 0 1958
ENSMUST00000159123 BC037034-004 nonsense_mediated_decay Mus_musculus 0 776
ENSMUST00000171557 BC037034-002 nonsense_mediated_decay Mus_musculus 0 776
ENSMUST00000159534 BC037034-005 retained_intron Mus_musculus 0 774
ENSMUST00000170479 BC037034-004 retained_intron Mus_musculus 0 774
ENSMUST00000128935 Gm8093-003 transcribed_processed_pseudogene Mus_musculus 0 558
ENSMUST00000159872 BC037034-006 retained_intron Mus_musculus 0 263
ENSMUST00000162632 BC037034-007 retained_intron Mus_musculus 0 224

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