C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein L7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000147604 RPL7 9606 - 8:73290267-73295789 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352983 RPL7-001 73290639-73293898 protein_coding
  ENST00000396465 RPL7-003 73291042-73294438 protein_coding
  ENST00000396466 RPL7-004 73291040-73295789 protein_coding
  ENST00000396467 RPL7-002 73290284-73293633 protein_coding
  ENST00000431653 RPL7-005 73291816-73293342 protein_coding
  ENST00000435330 RPL7-006 73291783-73292922 protein_coding
  ENST00000466821 RPL7-007 73291114-73291903 retained_intron
  ENST00000487500 RPL7-008 73290267-73291137 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000352983ENST00000396466ENST00000435330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000352983 221.373±0.00 75.937±0.00 59.695±0.00 67.760±22.77 187.985±39.75 188.645±43.08 49.797±15.62 87.963±9.01 108.695±84.91 114.249±28.94 106.180±0.00 361.670±174.84 147.630±139.01 172.716±6.20
ENST00000396466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1148.260±0.00 177.908±3.24 N/A
ENST00000435330 N/A N/A N/A 37.217±0.00 70.838±0.00 93.401±0.00 31.491±0.00 86.050±0.00 106.480±0.00 46.047±0.00 N/A 340.800±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00011X CIL_00011X_0001 CGP 8:73241329-73295789
CIL_0005C3 CIL_0005C3_0002 CGP 8:73290267-73325281

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003677 IDA DNA binding
GO:0003723 TAS RNA binding
GO:0003729 IDA mRNA binding
GO:0003735 NAS structural constituent of ribosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005925 IDA focal adhesion
GO:0006364 IMP rRNA processing
GO:0006412 NAS translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0022625 IDA cytosolic large ribosomal subunit
GO:0030529 IDA ribonucleoprotein complex
GO:0042273 IMP ribosomal large subunit biogenesis
GO:0042803 IPI protein homodimerization activity
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007320 rpl7 ribosomal protein L7 protein_coding Danio_rerio
ENSMUSG00000043716 Rpl7 ribosomal protein L7 protein_coding Mus_musculus

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