C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005C3_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000007320-ENSDARG00000012369 | CGP | 7955 | 2:29892308-29901139  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000007320  (rpl7)ribosomal protein L7 |
ENSDART00000019149 (rpl7-001)
|
29892308-29897185 | protein_coding | |
|
ENSDART00000132954 (rpl7-002)
|
29892731-29893305 | retained_intron | ||
|
ENSDARG00000012369 (rdh10b) retinol dehydrogenase 10b |
ENSDART00000004903 (rdh10b-001)
|
29897263-29901139 | protein_coding | |
|
ENSDART00000129759 (rdh10b-201)
|
29897625-29900727 | protein_coding | ||
| CIL_0005C3_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000147604-ENSG00000121039 | CGP | 9606 | 8:73290267-73325281 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000121039 (RDH10) retinol dehydrogenase 10 (all-trans) |
ENST00000240285 (RDH10-001)
|
73294612-73325281 | protein_coding | |
|
ENST00000518870 (RDH10-003)
|
73295516-73297740 | retained_intron | ||
|
ENST00000519380 (RDH10-002)
|
73297016-73323099 | protein_coding | ||
|
ENST00000521013 (RDH10-005)
|
73321840-73323308 | retained_intron | ||
|
ENST00000521928 (RDH10-004)
|
73295839-73320988 | protein_coding | ||
|
ENSG00000147604 (RPL7) ribosomal protein L7 |
ENST00000352983 (RPL7-001)
|
73290639-73293898 | protein_coding | |
|
ENST00000396465 (RPL7-003)
|
73291042-73294438 | protein_coding | ||
|
ENST00000396466 (RPL7-004)
|
73291040-73295789 | protein_coding | ||
|
ENST00000396467 (RPL7-002)
|
73290284-73293633 | protein_coding | ||
|
ENST00000431653 (RPL7-005)
|
73291816-73293342 | protein_coding | ||
|
ENST00000435330 (RPL7-006)
|
73291783-73292922 | protein_coding | ||
|
ENST00000466821 (RPL7-007)
|
73291114-73291903 | retained_intron | ||
|
ENST00000487500 (RPL7-008)
|
73290267-73291137 | processed_transcript | ||
|
ENSG00000250295 (RP11-434I12.2) |
ENST00000514599 (RP11-434I12.2-001)
|
73310906-73356461 | antisense | |
|
ENST00000517475 (RP11-434I12.2-003)
|
73315416-73356360 | antisense | ||
|
ENST00000520894 (RP11-434I12.2-002)
|
73297711-73315609 | antisense | ||
| CIL_0005C3_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000043716-ENSMUSG00000025921 | CGP | 10090 | 1:16101295-16133734 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000025921 (Rdh10) retinol dehydrogenase 10 (all-trans) |
ENSMUST00000027053 (Rdh10-001)
|
16105774-16133734 | protein_coding | |
|
ENSMUST00000152626 (Rdh10-002)
|
16130502-16132547 | retained_intron | ||
|
ENSMUSG00000043716 (Rpl7) ribosomal protein L7 |
ENSMUST00000058437 (Rpl7-001)
|
16101295-16104662 | protein_coding | |
|
ENSMUST00000125005 (Rpl7-004)
|
16102491-16104384 | retained_intron | ||
|
ENSMUST00000140597 (Rpl7-006)
|
16101295-16102082 | processed_transcript | ||
|
ENSMUST00000141217 (Rpl7-002)
|
16101306-16104402 | retained_intron | ||
|
ENSMUST00000149566 (Rpl7-003)
|
16101780-16104227 | protein_coding | ||
|
ENSMUST00000151017 (Rpl7-005)
|
16101528-16102848 | retained_intron | ||
Expression Patterns
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