C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3-domain GRB2-like endophilin B2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148341 SH3GLB2 9606 - 9:129007036-129028303 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000372554 SH3GLB2-008 129008039-129028279 protein_coding
  ENST00000372559 SH3GLB2-002 129008034-129028214 protein_coding
  ENST00000372564 SH3GLB2-001 129007036-129028300 protein_coding
  ENST00000416230 SH3GLB2-006 129014421-129028198 nonsense_mediated_decay
  ENST00000416629 SH3GLB2-012 129008450-129028210 protein_coding
  ENST00000417224 SH3GLB2-011 129008450-129028185 protein_coding
  ENST00000425236 SH3GLB2-007 129012230-129021211 nonsense_mediated_decay
  ENST00000455407 SH3GLB2-005 129009227-129028303 nonsense_mediated_decay
  ENST00000461811 SH3GLB2-004 129008137-129013950 retained_intron
  ENST00000477165 SH3GLB2-009 129011724-129014458 retained_intron
  ENST00000479237 SH3GLB2-003 129007792-129012016 retained_intron
  ENST00000483980 SH3GLB2-010 129009736-129028295 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000372554ENST00000372559ENST00000372564ENST00000417224ENST00000479237ENST00000483980
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000372554 N/A 33.251±23.06 18.991±0.00 N/A 10.256±0.00 N/A N/A 28.589±0.00 6.861±5.97 N/A 41.730±0.00
ENST00000372559 N/A N/A N/A N/A N/A N/A N/A N/A 2.354±0.00 52.528±0.00 31.634±6.21
ENST00000372564 N/A N/A N/A N/A N/A N/A N/A 2.255±0.00 N/A N/A N/A
ENST00000417224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.812±0.00
ENST00000479237 N/A N/A N/A N/A N/A 15.065±0.00 N/A N/A N/A 34.139±0.00 N/A
ENST00000483980 2.977±0.00 N/A N/A 8.709±0.00 N/A N/A 5.556±0.00 N/A 2.050±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LW CIL_0002LW_0002 CGP 9:128945530-129007096
CIL_0006OJ CIL_0006OJ_0001 CGP 9:128947699-129028303
CIL_0006OZ CIL_0006OZ_0001 CGP 9:129007036-129072082

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005737 IDA:IEA cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008983 sh3glb2a SH3-domain GRB2-like endophilin B2a protein_coding Danio_rerio
ENSDARG00000035470 sh3glb2b SH3-domain GRB2-like endophilin B2b protein_coding Danio_rerio
ENSMUSG00000026860 Sh3glb2 SH3-domain GRB2-like endophilin B2 protein_coding Mus_musculus

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