C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3-domain GRB2-like endophilin B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000483980 SH3GLB2-010 ENSG00000148341 9606 - 9:129009736-129028295 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLiverMuscleENST00000483980
Transcript ID Bladder Colon Liver Muscle
ENST00000483980 2.977±0.00 8.709±0.00 5.556±0.00 2.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LW CIL_0002LW_0002 CGP 9:128945530-129007096
CIL_0006OJ CIL_0006OJ_0001 CGP 9:128947699-129028303
CIL_0006OZ CIL_0006OZ_0001 CGP 9:129007036-129072082

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028214 Sh3glb2-001 protein_coding Mus_musculus 0 1199
ENSMUST00000113621 Sh3glb2-004 protein_coding Mus_musculus 0 1146
ENSMUST00000100215 Sh3glb2-002 protein_coding Mus_musculus 0 1138
ENSMUST00000151354 Sh3glb2-005 retained_intron Mus_musculus 0 802
ENSMUST00000163668 Sh3glb2-201 protein_coding Mus_musculus 0 778
ENSMUST00000113620 Sh3glb2-003 protein_coding Mus_musculus 0 771
ENSMUST00000151145 Sh3glb2-007 processed_transcript Mus_musculus 0 741
ENSMUST00000128387 Sh3glb2-013 processed_transcript Mus_musculus 0 664
ENSMUST00000139963 Sh3glb2-006 retained_intron Mus_musculus 0 652
ENSMUST00000140801 Sh3glb2-008 retained_intron Mus_musculus 0 619
ENSMUST00000140899 Sh3glb2-009 retained_intron Mus_musculus 0 394
ENSMUST00000142720 Sh3glb2-011 retained_intron Mus_musculus 0 294
ENSMUST00000146400 Sh3glb2-010 retained_intron Mus_musculus 0 289

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