C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0006OZ_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000148341-ENSG00000148343 | CGP | 9606 | 9:129007036-129072082  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000095319  (NUP188)nucleoporin 188kDa |
ENST00000372577 (NUP188-001)
|
128947699-129007096 | protein_coding | |
|
ENST00000464729 (NUP188-004)
|
128948959-128952895 | retained_intron | ||
|
ENST00000465344 (NUP188-008)
|
128983514-128985262 | processed_transcript | ||
|
ENST00000467044 (NUP188-011)
|
128993095-128994890 | processed_transcript | ||
|
ENST00000477069 (NUP188-002)
|
128984971-129003993 | retained_intron | ||
|
ENST00000485158 (NUP188-006)
|
128994396-128995200 | retained_intron | ||
|
ENST00000487952 (NUP188-012)
|
128999601-129001891 | retained_intron | ||
|
ENST00000491502 (NUP188-005)
|
128986589-128993230 | processed_transcript | ||
|
ENST00000491990 (NUP188-013)
|
128947707-128958054 | processed_transcript | ||
|
ENST00000495726 (NUP188-003)
|
128995136-128998596 | retained_intron | ||
|
ENST00000550219 (NUP188-010)
|
128948017-128957011 | processed_transcript | ||
|
ENSG00000148341 (SH3GLB2) SH3-domain GRB2-like endophilin B2 |
ENST00000372554 (SH3GLB2-008)
|
129008039-129028279 | protein_coding | |
|
ENST00000372559 (SH3GLB2-002)
|
129008034-129028214 | protein_coding | ||
|
ENST00000372564 (SH3GLB2-001)
|
129007036-129028300 | protein_coding | ||
|
ENST00000416230 (SH3GLB2-006)
|
129014421-129028198 | nonsense_mediated_decay | ||
|
ENST00000416629 (SH3GLB2-012)
|
129008450-129028210 | protein_coding | ||
|
ENST00000417224 (SH3GLB2-011)
|
129008450-129028185 | protein_coding | ||
|
ENST00000425236 (SH3GLB2-007)
|
129012230-129021211 | nonsense_mediated_decay | ||
|
ENST00000455407 (SH3GLB2-005)
|
129009227-129028303 | nonsense_mediated_decay | ||
|
ENST00000461811 (SH3GLB2-004)
|
129008137-129013950 | retained_intron | ||
|
ENST00000477165 (SH3GLB2-009)
|
129011724-129014458 | retained_intron | ||
|
ENST00000479237 (SH3GLB2-003)
|
129007792-129012016 | retained_intron | ||
|
ENST00000483980 (SH3GLB2-010)
|
129009736-129028295 | retained_intron | ||
|
ENSG00000148343 (FAM73B) family with sequence similarity 73, member B |
ENST00000358369 (FAM73B-001)
|
129036934-129072082 | protein_coding | |
|
ENST00000414342 (FAM73B-013)
|
129063287-129069095 | nonsense_mediated_decay | ||
|
ENST00000439290 (FAM73B-002)
|
129036644-129072071 | nonsense_mediated_decay | ||
|
ENST00000445183 (FAM73B-003)
|
129036646-129072071 | nonsense_mediated_decay | ||
|
ENST00000450073 (FAM73B-009)
|
129036995-129042506 | protein_coding | ||
|
ENST00000471943 (FAM73B-012)
|
129067508-129068400 | retained_intron | ||
|
ENST00000474534 (FAM73B-007)
|
129036621-129047224 | processed_transcript | ||
|
ENST00000474639 (FAM73B-011)
|
129060482-129068311 | processed_transcript | ||
|
ENST00000477088 (FAM73B-010)
|
129036621-129042400 | processed_transcript | ||
|
ENST00000483458 (FAM73B-004)
|
129069259-129072071 | retained_intron | ||
|
ENST00000492279 (FAM73B-008)
|
129068934-129069934 | retained_intron | ||
|
ENST00000494608 (FAM73B-006)
|
129060552-129063630 | processed_transcript | ||
|
ENST00000495975 (FAM73B-005)
|
129061297-129068014 | processed_transcript | ||
| CIL_0006OZ_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026860-ENSMUSG00000026858 | CGP | 10090 | 2:30344809-30385521 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026858 (Fam73b) family with sequence similarity 73, member B |
ENSMUST00000077977 (Fam73b-001)
|
30364233-30385521 | protein_coding | |
|
ENSMUST00000100214 (Fam73b-002)
|
30364296-30385519 | protein_coding | ||
|
ENSMUST00000116543 (Fam73b-012)
|
30368415-30371202 | protein_coding | ||
|
ENSMUST00000125610 (Fam73b-008)
|
30378235-30382007 | retained_intron | ||
|
ENSMUST00000127410 (Fam73b-006)
|
30367695-30369305 | retained_intron | ||
|
ENSMUST00000135841 (Fam73b-007)
|
30371282-30376659 | retained_intron | ||
|
ENSMUST00000137441 (Fam73b-004)
|
30364266-30369304 | retained_intron | ||
|
ENSMUST00000140075 (Fam73b-003)
|
30364254-30379094 | protein_coding | ||
|
ENSMUST00000142801 (Fam73b-005)
|
30364293-30370405 | protein_coding | ||
|
ENSMUST00000146308 (Fam73b-009)
|
30364245-30368697 | processed_transcript | ||
|
ENSMUST00000175864 (Fam73b-011)
|
30381713-30384100 | protein_coding | ||
|
ENSMUST00000176517 (Fam73b-010)
|
30381944-30384206 | protein_coding | ||
|
ENSMUSG00000026860 (Sh3glb2) SH3-domain GRB2-like endophilin B2 |
ENSMUST00000028214 (Sh3glb2-001)
|
30344809-30359316 | protein_coding | |
|
ENSMUST00000100215 (Sh3glb2-002)
|
30344809-30359240 | protein_coding | ||
|
ENSMUST00000113620 (Sh3glb2-003)
|
30344811-30359265 | protein_coding | ||
|
ENSMUST00000113621 (Sh3glb2-004)
|
30344811-30359332 | protein_coding | ||
|
ENSMUST00000128387 (Sh3glb2-013)
|
30345820-30359337 | processed_transcript | ||
|
ENSMUST00000139963 (Sh3glb2-006)
|
30349740-30359260 | retained_intron | ||
|
ENSMUST00000140801 (Sh3glb2-008)
|
30348068-30355365 | retained_intron | ||
|
ENSMUST00000140899 (Sh3glb2-009)
|
30348090-30354880 | retained_intron | ||
|
ENSMUST00000142689 (Sh3glb2-012)
|
30345141-30346101 | processed_transcript | ||
|
ENSMUST00000142720 (Sh3glb2-011)
|
30346108-30347587 | retained_intron | ||
|
ENSMUST00000146400 (Sh3glb2-010)
|
30345886-30347656 | retained_intron | ||
|
ENSMUST00000151145 (Sh3glb2-007)
|
30349483-30359245 | processed_transcript | ||
|
ENSMUST00000151354 (Sh3glb2-005)
|
30345135-30359305 | retained_intron | ||
|
ENSMUST00000163668 (Sh3glb2-201)
|
30344811-30359289 | protein_coding | ||
|
ENSMUSG00000078010 (Gm23489) predicted gene, 23489 |
ENSMUST00000104817 (Gm23489-201)
|
30353443-30353527 | miRNA | |
Expression Patterns
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