C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (zinc transporter), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000148482 SLC39A12 9606 + 10:17951839-18043292 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377369 SLC39A12-201 17951839-18043292 protein_coding
  ENST00000377371 SLC39A12-001 17951914-18043287 protein_coding
  ENST00000377374 SLC39A12-002 17951892-18043287 protein_coding
  ENST00000539911 SLC39A12-202 17951839-18043292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLungMuscleTestisENST00000377369ENST00000377371ENST00000377374ENST00000539911
Transcript ID Adipose Brain Breast Colon Lung Muscle Testis
ENST00000377369 N/A 3.718±0.49 N/A N/A N/A N/A N/A
ENST00000377371 N/A 6.634±0.00 N/A N/A N/A N/A 0.079±0.00
ENST00000377374 N/A 3.048±1.32 0.053±0.00 N/A N/A N/A 0.162±0.00
ENST00000539911 0.027±0.00 N/A 0.029±0.00 0.015±0.00 0.043±0.00 0.026±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A6 CIL_0005A6_0001 CGP 10:17809344-18043292
CIL_0005AA CIL_0005AA_0001 CGP 10:17951839-18541869

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005385 IEA zinc ion transmembrane transporter activity
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0010975 IEA regulation of neuron projection development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0031113 IEA regulation of microtubule polymerization
GO:0031982 IDA vesicle
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055085 IEA transmembrane transport
GO:0071578 IEA zinc ion transmembrane import

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000036949 Slc39a12 solute carrier family 39 (zinc transporter), member 12 protein_coding Mus_musculus

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