C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 39 (zinc transporter), member 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036949 Slc39a12 10090 + 2:14388316-14494977 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000082290 Slc39a12-002 14388399-14494977 protein_coding
  ENSMUST00000114731 Slc39a12-001 14388316-14494975 protein_coding
  ENSMUST00000133258 Slc39a12-003 14388512-14389539 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082290ENSMUST00000114731ENSMUST00000133258
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082290 0.053±0.05 0.046±0.00 0.064±0.01 1.969±1.84 0.017±0.00 0.057±0.02 0.008±0.00 0.029±0.02 0.041±0.01 0.150±0.07 N/A 0.160±0.07 0.042±0.04 0.128±0.02
ENSMUST00000114731 0.005±0.00 N/A N/A N/A 0.011±0.01 N/A 0.005±0.00 0.006±0.00 0.032±0.02 N/A 0.025±0.01 0.018±0.01 0.015±0.01 N/A
ENSMUST00000133258 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.03 N/A N/A 0.544±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A6 CIL_0005A6_0002 CGP 2:14229414-14494977
CIL_0005AA CIL_0005AA_0002 CGP 2:14388316-14987908

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005385 IDA zinc ion transmembrane transporter activity
GO:0005886 IDA plasma membrane
GO:0007165 IDA signal transduction
GO:0010975 IMP regulation of neuron projection development
GO:0016021 IEA integral component of membrane
GO:0031113 IMP regulation of microtubule polymerization
GO:0031982 IEA vesicle
GO:0048471 IDA perinuclear region of cytoplasm
GO:0071578 IDA zinc ion transmembrane import

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000148482 SLC39A12 solute carrier family 39 (zinc transporter), member 12 protein_coding Homo_sapiens

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