C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 39 (zinc transporter), member 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377369 SLC39A12-201 ENSG00000148482 9606 + 10:17951839-18043292 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000377369
Transcript ID Brain
ENST00000377369 3.718±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A6 CIL_0005A6_0001 CGP 10:17809344-18043292
CIL_0005AA CIL_0005AA_0001 CGP 10:17951839-18541869

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005385 IEA zinc ion transmembrane transporter activity
GO:0005886 IEA plasma membrane
GO:0007165 IEA signal transduction
GO:0010975 IEA regulation of neuron projection development
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030001 IEA metal ion transport
GO:0031113 IEA regulation of microtubule polymerization
GO:0031982 IDA vesicle
GO:0046873 IEA metal ion transmembrane transporter activity
GO:0048471 IEA perinuclear region of cytoplasm
GO:0055085 IEA transmembrane transport
GO:0071578 IEA zinc ion transmembrane import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082290 Slc39a12-002 protein_coding Mus_musculus 0 1700
ENSMUST00000114731 Slc39a12-001 protein_coding Mus_musculus 0 1149

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