C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0005A6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000260314-ENSG00000148482 CGP 9606 10:17809344-18043292
GeneTranscriptPositionBiotype
ENSG00000148482 (SLC39A12)
solute carrier family 39 (zinc transporter), member 12
ENST00000377369 (SLC39A12-201) 17951839-18043292 protein_coding
ENST00000377371 (SLC39A12-001) 17951914-18043287 protein_coding
ENST00000377374 (SLC39A12-002) 17951892-18043287 protein_coding
ENST00000539911 (SLC39A12-202) 17951839-18043292 protein_coding
ENSG00000207938 (MIR511)
microRNA 511
ENST00000385203 (MIR511-201) 17845107-17845193 miRNA
ENSG00000226083 (SLC39A12-AS1)
SLC39A12 antisense RNA 1
ENST00000439319 (SLC39A12-AS1-001) 18001786-18010562 antisense
ENST00000445287 (SLC39A12-AS1-002) 18003104-18007270 antisense
ENSG00000235637 (RP11-457D2.3)
ENST00000442231 (RP11-457D2.3-001) 17862887-17865471 antisense
ENSG00000260314 (MRC1)
mannose receptor, C type 1
ENST00000569591 (MRC1-001) 17809344-17911170 protein_coding
CIL_0005A6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026712-ENSMUSG00000036949 CGP 10090 2:14229414-14494977
GeneTranscriptPositionBiotype
ENSMUSG00000026712 (Mrc1)
mannose receptor, C type 1
ENSMUST00000028045 (Mrc1-001) 14229414-14332057 protein_coding
ENSMUST00000146168 (Mrc1-002) 14328561-14330519 processed_transcript
ENSMUSG00000036949 (Slc39a12)
solute carrier family 39 (zinc transporter), member 12
ENSMUST00000082290 (Slc39a12-002) 14388399-14494977 protein_coding
ENSMUST00000114731 (Slc39a12-001) 14388316-14494975 protein_coding
ENSMUST00000133258 (Slc39a12-003) 14388512-14389539 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A6_0001ENSG00000148482ENST00000377369ENST00000377371ENST00000377374ENST00000539911ENSG00000207938ENST00000385203ENSG00000226083ENST00000439319ENST00000445287ENSG00000235637ENST00000442231ENSG00000260314ENST00000569591CIL_0005A6_0002ENSMUSG00000026712ENSMUST00000028045ENSMUST00000146168ENSMUSG00000036949ENSMUST00000082290ENSMUST00000114731ENSMUST00000133258
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A6_0001ENSG00000148482ENST00000377369ENST00000377371ENST00000377374ENST00000539911ENSG00000207938ENST00000385203ENSG00000226083ENST00000439319ENST00000445287ENSG00000235637ENST00000442231ENSG00000260314ENST00000569591CIL_0005A6_0002ENSMUSG00000026712ENSMUST00000028045ENSMUSG00000036949ENSMUST00000082290ENSMUST00000114731ENSMUST00000133258
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148482 ENST00000377369 N/A N/A N/A 3.718±0.49 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377371 N/A N/A N/A 6.634±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.079±0.00
ENST00000377374 N/A N/A N/A 3.048±1.32 0.053±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.162±0.00
ENST00000539911 0.027±0.00 N/A N/A N/A 0.029±0.00 0.015±0.00 N/A N/A N/A 0.043±0.00 0.026±0.00 N/A N/A N/A
ENSG00000207938 ENST00000385203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.945±0.00 N/A
ENSG00000226083 ENST00000439319 0.011±0.00 0.138±0.00 N/A N/A 0.295±0.00 0.035±0.00 0.200±0.00 0.136±0.00 2.342±0.00 0.081±0.00 0.025±0.00 0.032±0.00 N/A 0.068±0.00
ENST00000445287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.043±0.00 0.109±0.02
ENSG00000235637 ENST00000442231 N/A 0.126±0.00 N/A N/A N/A N/A N/A N/A 0.682±0.00 N/A N/A N/A N/A N/A
ENSG00000260314 ENST00000569591 17.012±0.00 10.486±0.00 1.705±0.00 0.800±0.12 6.276±0.54 2.642±0.00 4.598±2.20 6.506±0.30 11.478±0.29 22.945±8.63 0.782±0.40 2.187±1.01 17.436±7.78 3.319±2.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026712 ENSMUST00000028045 6.195±2.65 1.032±0.27 7.073±1.50 0.995±0.42 6.784±1.83 1.398±0.52 1.995±0.15 0.648±0.25 3.028±1.43 5.430±0.64 0.829±0.29 2.395±1.66 2.879±2.41 2.208±0.54
ENSMUST00000146168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036949 ENSMUST00000082290 0.053±0.05 0.046±0.00 0.064±0.01 1.969±1.84 0.017±0.00 0.057±0.02 0.008±0.00 0.029±0.02 0.041±0.01 0.150±0.07 N/A 0.160±0.07 0.042±0.04 0.128±0.02
ENSMUST00000114731 0.005±0.00 N/A N/A N/A 0.011±0.01 N/A 0.005±0.00 0.006±0.00 0.032±0.02 N/A 0.025±0.01 0.018±0.01 0.015±0.01 N/A
ENSMUST00000133258 N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.03 N/A N/A 0.544±0.00 N/A N/A

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