C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latrophilin 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000150471 LPHN3 9606 + 4:61201258-62078335 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000502815 LPHN3-002 61895741-62072437 protein_coding
  ENST00000504896 LPHN3-012 61497199-62071038 protein_coding
  ENST00000506700 LPHN3-015 61497121-62071138 protein_coding
  ENST00000506720 LPHN3-008 61497294-62071127 protein_coding
  ENST00000506746 LPHN3-009 61497294-62071127 protein_coding
  ENST00000507164 LPHN3-004 61497165-62070993 protein_coding
  ENST00000507625 LPHN3-016 61497188-62071058 protein_coding
  ENST00000508078 LPHN3-017 61933843-61947077 processed_transcript
  ENST00000508693 LPHN3-011 61497165-62070993 protein_coding
  ENST00000508946 LPHN3-007 61497294-62071127 protein_coding
  ENST00000509089 LPHN3-018 61587368-61677392 retained_intron
  ENST00000509779 LPHN3-019 61201664-61385769 processed_transcript
  ENST00000509896 LPHN3-013 61497121-62071138 protein_coding
  ENST00000511324 LPHN3-014 61497121-62071138 protein_coding
  ENST00000512091 LPHN3-001 61201258-62078335 protein_coding
  ENST00000514157 LPHN3-006 61497199-62071038 protein_coding
  ENST00000514591 LPHN3-003 61202142-62072466 protein_coding
  ENST00000514996 LPHN3-010 61497294-62071127 protein_coding
  ENST00000545650 LPHN3-201 61730615-62072437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000502815ENST00000506700ENST00000507164ENST00000507625ENST00000508078ENST00000511324ENST00000512091ENST00000514157ENST00000514591ENST00000514996ENST00000545650
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000502815 0.740±0.00 0.607±0.00 N/A 4.284±0.00 0.253±0.00 1.643±0.00 0.789±0.00 0.318±0.25 N/A 0.508±0.00 0.110±0.00 0.382±0.12 0.422±0.00 1.224±0.00
ENST00000506700 N/A N/A N/A N/A N/A N/A N/A N/A 0.970±0.00 N/A N/A 0.317±0.00 N/A N/A
ENST00000507164 N/A N/A N/A 9.225±0.00 N/A N/A N/A N/A N/A 0.804±0.00 N/A N/A N/A N/A
ENST00000507625 0.710±0.00 N/A N/A N/A N/A N/A 0.709±0.00 N/A 0.336±0.31 N/A 0.453±0.00 0.219±0.00 N/A N/A
ENST00000508078 N/A N/A 2.011±0.00 N/A 2.517±0.00 N/A N/A 0.490±0.00 N/A 6.687±0.00 N/A 1.787±0.00 N/A N/A
ENST00000511324 N/A N/A N/A N/A N/A 0.936±0.00 N/A N/A 0.581±0.00 N/A N/A N/A N/A N/A
ENST00000512091 0.470±0.00 N/A N/A 2.530±0.87 0.256±0.00 N/A 0.290±0.00 0.061±0.02 0.280±0.27 0.554±0.00 N/A 0.046±0.00 0.036±0.00 N/A
ENST00000514157 N/A N/A N/A N/A N/A N/A 0.583±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000514591 N/A N/A N/A N/A N/A 0.762±0.00 0.325±0.00 N/A N/A 0.421±0.11 N/A N/A 0.179±0.02 0.659±0.00
ENST00000514996 N/A N/A 0.595±0.00 N/A N/A N/A N/A N/A 0.017±0.00 N/A N/A 0.359±0.00 N/A N/A
ENST00000545650 0.861±0.00 0.543±0.00 0.142±0.00 3.422±0.00 0.446±0.23 0.771±0.01 N/A 0.166±0.04 0.503±0.00 0.374±0.00 0.139±0.00 0.133±0.09 0.320±0.13 1.140±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0001 CGP 4:57030773-62078335
CIL_0001WJ CIL_0001WJ_0001 CGP 4:61201258-64409468

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IEA protein binding
GO:0005886 IEA plasma membrane
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061121 lphn3.1 latrophilin 3.1 protein_coding Danio_rerio
ENSDARG00000090624 LPHN3 (2 of 2) latrophilin 3 protein_coding Danio_rerio
ENSMUSG00000037605 Lphn3 latrophilin 3 protein_coding Mus_musculus

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