C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: latrophilin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000502815 LPHN3-002 ENSG00000150471 9606 + 4:61895741-62072437 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000502815
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000502815 0.740±0.00 0.607±0.00 4.284±0.00 0.253±0.00 1.643±0.00 0.789±0.00 0.318±0.25 0.508±0.00 0.110±0.00 0.382±0.12 0.422±0.00 1.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WQ CIL_0001WQ_0001 CGP 4:57030773-62078335
CIL_0001WJ CIL_0001WJ_0001 CGP 4:61201258-64409468

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124117 Lphn3-018 protein_coding Mus_musculus 0 3746
ENSMUST00000121707 Lphn3-001 protein_coding Mus_musculus 0 3494
ENSMUST00000132375 Lphn3-002 nonsense_mediated_decay Mus_musculus 0 3463
ENSMUST00000036068 Lphn3-201 protein_coding Mus_musculus 0 3380
ENSMUST00000072521 Lphn3-202 protein_coding Mus_musculus 0 3380
ENSMUST00000122037 Lphn3-023 protein_coding Mus_musculus 0 3332
ENSMUST00000122356 Lphn3-009 protein_coding Mus_musculus 0 3332
ENSMUST00000119385 Lphn3-008 protein_coding Mus_musculus 0 2259
ENSMUST00000118078 Lphn3-011 protein_coding Mus_musculus 0 2259
ENSMUST00000117407 Lphn3-005 protein_coding Mus_musculus 0 2255
ENSMUST00000121641 Lphn3-017 protein_coding Mus_musculus 0 2255
ENSMUST00000118034 Lphn3-015 protein_coding Mus_musculus 0 2255
ENSMUST00000120144 Lphn3-012 protein_coding Mus_musculus 0 2255
ENSMUST00000117253 Lphn3-006 protein_coding Mus_musculus 0 2255
ENSMUST00000118442 Lphn3-016 protein_coding Mus_musculus 0 2145
ENSMUST00000120128 Lphn3-007 protein_coding Mus_musculus 0 2145
ENSMUST00000119788 Lphn3-010 protein_coding Mus_musculus 0 2141
ENSMUST00000120292 Lphn3-020 protein_coding Mus_musculus 0 2141
ENSMUST00000117985 Lphn3-019 protein_coding Mus_musculus 0 2141
ENSMUST00000120673 Lphn3-014 protein_coding Mus_musculus 0 2141
ENSMUST00000120445 Lphn3-013 protein_coding Mus_musculus 0 2141
ENSMUST00000153264 Lphn3-029 processed_transcript Mus_musculus 0 1993
ENSMUST00000149280 Lphn3-022 retained_intron Mus_musculus 0 612
ENSDART00000131113 LPHN3 (2 of 2)-201 protein_coding Danio_rerio 0 337
ENSMUST00000136104 Lphn3-021 retained_intron Mus_musculus 0 265

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