C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | latrophilin 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000509896  |
LPHN3-013 |
ENSG00000150471 |
9606 | + |
4:61497121-62071138  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001WQ | CIL_0001WQ_0001 | CGP | 4:57030773-62078335 |
| CIL_0001WJ | CIL_0001WJ_0001 | CGP | 4:61201258-64409468 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004888 | IEA | transmembrane signaling receptor activity |
| GO:0004930 | IEA | G-protein coupled receptor activity |
| GO:0005515 | IEA | protein binding |
| GO:0005886 | IEA | plasma membrane |
| GO:0007166 | IEA | cell surface receptor signaling pathway |
| GO:0007186 | IEA | G-protein coupled receptor signaling pathway |
| GO:0007218 | IEA | neuropeptide signaling pathway |
| GO:0016020 | IEA | membrane |
| GO:0016021 | IEA | integral component of membrane |
| GO:0030246 | IEA | carbohydrate binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000118442
|
Lphn3-016 | protein_coding | Mus_musculus | 0 | 6154 |
|
ENSMUST00000119788
|
Lphn3-010 | protein_coding | Mus_musculus | 0 | 5969 |
|
ENSMUST00000119385
|
Lphn3-008 | protein_coding | Mus_musculus | 0 | 5893 |
|
ENSMUST00000120128
|
Lphn3-007 | protein_coding | Mus_musculus | 0 | 5866 |
|
ENSMUST00000118078
|
Lphn3-011 | protein_coding | Mus_musculus | 0 | 5657 |
|
ENSMUST00000072521
|
Lphn3-202 | protein_coding | Mus_musculus | 0 | 4955 |
|
ENSMUST00000036068
|
Lphn3-201 | protein_coding | Mus_musculus | 0 | 4933 |
|
ENSMUST00000120673
|
Lphn3-014 | protein_coding | Mus_musculus | 0 | 4929 |
|
ENSMUST00000120445
|
Lphn3-013 | protein_coding | Mus_musculus | 0 | 4929 |
|
ENSMUST00000121707
|
Lphn3-001 | protein_coding | Mus_musculus | 0 | 4752 |
|
ENSMUST00000122356
|
Lphn3-009 | protein_coding | Mus_musculus | 0 | 4723 |
|
ENSMUST00000117407
|
Lphn3-005 | protein_coding | Mus_musculus | 0 | 4723 |
|
ENSMUST00000121641
|
Lphn3-017 | protein_coding | Mus_musculus | 0 | 4723 |
|
ENSMUST00000120292
|
Lphn3-020 | protein_coding | Mus_musculus | 0 | 4641 |
|
ENSMUST00000117985
|
Lphn3-019 | protein_coding | Mus_musculus | 0 | 4641 |
|
ENSMUST00000122037
|
Lphn3-023 | protein_coding | Mus_musculus | 0 | 4434 |
|
ENSMUST00000118034
|
Lphn3-015 | protein_coding | Mus_musculus | 0 | 4434 |
|
ENSMUST00000120144
|
Lphn3-012 | protein_coding | Mus_musculus | 0 | 4434 |
|
ENSMUST00000117253
|
Lphn3-006 | protein_coding | Mus_musculus | 0 | 4431 |
|
ENSMUST00000132375
|
Lphn3-002 | nonsense_mediated_decay | Mus_musculus | 0 | 4375 |
|
ENSMUST00000136104
|
Lphn3-021 | retained_intron | Mus_musculus | 0 | 2795 |
|
ENSMUST00000149280
|
Lphn3-022 | retained_intron | Mus_musculus | 0 | 2462 |
|
ENSMUST00000124117
|
Lphn3-018 | protein_coding | Mus_musculus | 0 | 2100 |
|
ENSMUST00000127046
|
Lphn3-024 | retained_intron | Mus_musculus | 0 | 1622 |
|
ENSMUST00000153264
|
Lphn3-029 | processed_transcript | Mus_musculus | 0 | 1131 |
|
ENSMUST00000140356
|
Lphn3-025 | retained_intron | Mus_musculus | 0 | 736 |
|
ENSMUST00000126227
|
Lphn3-031 | processed_transcript | Mus_musculus | 0 | 654 |
|
ENSMUST00000147226
|
Lphn3-026 | retained_intron | Mus_musculus | 0 | 558 |
|
ENSMUST00000134597
|
Lphn3-030 | processed_transcript | Mus_musculus | 0 | 291 |
|
ENSDART00000131113
|
LPHN3 (2 of 2)-201 | protein_coding | Danio_rerio | 2e-40 | 172 |
